Job Description P39400 Confidence 100.00% Date Thu Jan 5 12:00:35 GMT 2012 Rank 31 Aligned Residues 312 % Identity 17% Template c2j8zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human p53 inducible oxidoreductase (2 tp53i3,pig3) Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																																										.
Query SS confidence											.	.	.																																										.
Query Sequence		S	T	M	N	V	L	I	C	Q	.	.	.	Q	P	K	E	L	V	W	K	Q	R	E	I	P	I	P	G	D	N	E	A	L	I	K	I	K	S	V	G	I	C	G	T	D	I	H	A	W	G	G	N	Q	.	P	F	F	S	Y	P	R	V	L	G	H	E	I	C	G	E	I	V	G	L	G	K	N	I	A	D
Query Conservation											.	.	.																																										.
Alig confidence											.	.	.																																										.
Template Conservation
Template Sequence		Q	S	M	L	A	V	H	F	D	K	P	G	G	P	E	N	L	Y	V	K	E	V	A	K	P	S	P	G	E	G	E	V	L	L	K	V	A	A	S	A	L	N	R	A	D	L	M	Q	R	Q	G	Q	Y	D	P	P	P	G	A	S	N	I	L	G	L	E	A	S	G	H	V	A	E	L	G	P	G	C	Q	H
Template Known Secondary structure										S	S		S	S	G	G	G													T	T																					T	S	S				T	T	S		S	S	S		S											S			.
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	N	G	Q	Q	V	A	V	I	P	Y	V	A	C	Q	Q	C	P	A	C	K	S	G	R	T	N	C	C	E	K	I	S	V	I	G	V	H	Q	D	G	G	F	S	E	Y	L	S	V	P	V	A	N	I	L	P	A	D	G	I	D	P	Q	A	A	A	L	I	E	P	F	A	I	S	A	H	A	V	R	R
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	K	I	G	D	T	A	M	A	L	L	P	G	G	G	Q	A	Q	Y	V	T	V	P	E	G	L	L	M	P	I	P	E	G	L	T	L	T	Q	A	A	A	I	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	W	L	T	A	F	Q	L	L	H	L	V	G
Template Known Secondary structure				T	T								S	S			S	B	S						G	G	G						T	T							T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																								.	.	.	.	.	130	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	A	P	G	E	Q	V	L	V	V	G	A	G	P	I	G	L	G	A	A	A	I	A	K	A	D	G	A	Q	V	V	V	A	D	T	S	P	A	R	R	E	H	V	A	T	R	L	E	L	P	L	L	D	P	S	A	E	D	F	D	A	Q	L	R	A	Q	F	G	G	S	L	A	Q	K	V	I	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	Q	A	G	D	Y	V	L	I	H	A	G	L	S	G	V	G	T	A	A	I	Q	L	T	R	M	A	G	A	I	P	L	V	T	A	G	S	Q	K	K	L	Q	M	A	E	K	L	G	A	A	A	G	F	N	Y	K	K	E	D	F	S	E	A	T	L	K	F	T	K	G	A	G	V	N	L	I	L	D	C
Template Known Secondary structure					T	T						S	S	T	T	S													T	T								S												T		S					T	T	T	S										T	T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.											290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																															.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	N	Q	H	A	M	N	N	T	V	N	L	I	R	H	G	G	T	V	V	F	V	G	L	F	K	G	E	.	L	Q	F	S	D	P	E	F	H	K	K	E	T	T	M	M	G	S	R	N	A	T	P	.	.	.	.	.	.	.	.	.	.	E	D	F	A	K	V	G	R	L	M	A	E	G	K	I	T	A
Query Conservation																															.																								.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	G	S	Y	W	E	K	N	V	N	C	L	A	L	D	G	R	W	V	L	Y	G	L	M	G	G	G	D	I	N	G	P	L	F	S	K	L	L	F	K	R	G	S	L	I	T	S	L	L	R	S	R	D	N	K	Y	K	Q	M	L	V	N	A	F	T	E	Q	I	L	P	H	F	S	T	Q	R	L	L	P
Template Known Secondary structure		S		G	G	G																				T	T		S				S									T	T								S	T	T																	T	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	M	L	T	H	R	Y	P	F	A	T	L	A	E	T	Y	E	R	D	V	I	N	N	R	E	L	I	K	G	V	I	T
Query Conservation
Alig confidence		.	.																		.
Template Conservation		.	.																		.
Template Sequence		.	.	V	L	D	R	I	Y	P	V	T	E	I	Q	E	A	H	K	Y	.	M	E	A	N	K	N	I	G	K	I	V	L	E
Template Known Secondary structure		.	.								G	G	G								.			T	T			S	S
Template Predicted Secondary structure		.	.																		.
Template SS confidence
				301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions