Job Description P39400 Confidence 100.00% Date Thu Jan 5 12:00:35 GMT 2012 Rank 52 Aligned Residues 314 % Identity 15% Template c2j3iB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent oxidoreductase p1; PDBTitle: crystal structure of arabidopsis thaliana double bond2 reductase (at5g16970)-binary complex Resolution 2.8 Å

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		1	.		.	.	.	.	.	.	.	10	.								.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.			.	.
Predicted Secondary structure				.										.	.	.	.	.	.	.															.	.	.																													.	.	.										.	.
Query SS confidence				.										.	.	.	.	.	.	.															.	.	.																													.	.	.										.	.
Query Sequence		M	S	.	T	M	N	V	L	I	C	Q	Q	.	.	.	.	.	.	.	P	K	E	L	V	W	K	Q	R	E	I	P	I	P	.	.	.	G	D	N	E	A	L	I	K	I	K	S	V	G	I	C	G	T	D	I	H	A	W	G	G	N	Q	P	F	.	.	.	F	S	Y	P	R	V	L	G	H	.	.	E	I
Query Conservation				.										.	.	.	.	.	.	.															.	.	.																													.	.	.										.	.
Alig confidence				.										.	.	.	.	.	.	.															.	.	.																													.	.	.										.	.
Template Conservation
Template Sequence		M	T	A	T	N	K	Q	V	I	L	K	D	Y	V	S	G	F	P	T	E	S	D	F	D	F	T	T	T	T	V	E	L	R	V	P	E	G	T	N	S	V	L	V	K	N	L	Y	L	S	C	D	P	Y	M	R	I	R	M	G	K	P	D	P	S	T	A	A	L	A	Q	A	Y	T	P	G	Q	P	I	Q	G
Template Known Secondary structure								B				S	S		B	S	S	S			G	G	G											S				S	S	S													G	G	G	G	T	T	T	B				T	T	T	T			.					T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		1001	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	E	I	V	G	L	G	K	N	I	A	D	L	K	N	G	Q	Q	V	A	V	I	P	Y	V	A	C	Q	Q	C	P	A	C	K	S	G	R	T	N	C	C	E	K	I	S	V	I	G	V	H	Q	D	G	G	F	S	E	Y	L	S	V	P	V	A	N	I	L	P	A	D	G	I	D	P	Q	A	A	A	L
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	V	S	R	I	I	E	S	G	H	P	D	Y	K	K	G	D	L	L	W	G	I	V	A	W	E	E	Y	S	V	I	T	P	M	T	H	A	H	F	K	I	Q	H	T	D	V	P	L	S	Y	Y	T	G	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M
Template Known Secondary structure												S	T	T			T	T									S	B	S	S							T	T	T								S	S		G	G	G	G	G	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1081	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.																							.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	P	F	A	I	S	A	H	A	V	R	R	A	A	I	A	P	G	E	Q	V	L	V	V	G	A	G	P	I	G	L	G	A	A	A	I	A	K	A	D	G	A	Q	V	V	V	A	D	T	S	P	A	R	R	E	H	V	A	T	R	L	E	L	P	L	L	D	P	S	A	E	D	F	D	A	Q	L	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	M	T	A	Y	A	G	F	Y	E	V	C	S	P	K	E	G	E	T	V	Y	V	S	A	A	S	G	A	V	G	Q	L	V	G	Q	L	A	K	M	M	G	C	Y	V	V	G	S	A	G	S	K	E	K	V	D	L	L	K	T	K	F	G	F	D	D	A	F	N	Y	K	E	E	S	D	L	T	A	A	L
Template Known Secondary structure												T	T	S				T	T						S	S		S	S	T	T										T	T	T								S	S	T	T							T	T	T			S					T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		1139	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																											.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																											.	.	.	.	.
Query Sequence		Q	F	G	G	S	L	A	Q	K	V	I	D	A	T	G	N	Q	H	A	M	N	N	T	V	N	L	I	R	H	G	G	T	V	V	F	V	G	.	.	.	.	.	.	L	F	K	G	E	L	Q	F	S	D	P	E	F	H	K	K	E	T	T	M	M	G	S	R	N	A	.	.	.	.	.	T	P	E	D	F	A
Query Conservation																																							.	.	.	.	.	.																											.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		K	R	C	F	P	N	G	I	D	I	Y	F	E	N	V	G	G	K	M	L	D	A	V	L	V	N	M	N	M	H	G	R	I	A	V	C	G	M	I	S	Q	Y	N	L	E	N	Q	E	G	V	H	N	L	S	N	I	I	Y	K	R	N	R	I	Q	G	F	V	V	S	D	F	Y	D	K	Y	S	K	F	L	E
Template Known Secondary structure						T	T		B	S					S	S		T										B		T	T									T	T	G	G	G		S	S							G	G	G	G	G	T	S									G	G	G	G	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1219	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	G	R	L	M	A	E	G	K	I	T	A	D	M	M	L	T	H	R	Y	P	F	A	T	L	A	E	T	Y	E	R	D	V	I	N	N	R	E	L	I	K	G	V	I	T
Query Conservation
Alig confidence															.	.																	.
Template Conservation															.	.																	.
Template Sequence		F	V	L	P	H	I	R	E	G	K	I	T	Y	.	.	V	E	D	V	A	D	G	L	E	K	A	P	E	A	L	V	.	G	L	F	H	G	K	N	V	G	K	Q	V	V	V
Template Known Secondary structure								T	T	T	S				.	.						B	S	G	G	G							.		T	T	T	T			S	S
Template Predicted Secondary structure															.	.																	.
Template SS confidence
		1299	1300	.	.	.	.	.	.	.	.	.	1310	.			.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.		.	.	1330	.	.	.	.	.	.	.	.	.	1340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions