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Job DescriptionP39400
Confidence100.00%DateThu Jan 5 12:00:35 GMT 2012
Rank8Aligned Residues333
% Identity21%Templatec2eihA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of nad-dependent alcohol dehydrogenase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.... .....20.........30.........40.........50.... .....60.........70.........
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Query Sequence  MNVLICQQPKE. . . LVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFF. SYPRVLGHEICGEIVGLGKNIADLK
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Template Sequence  MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA
Template Known Secondary structure 

SSSSGGG






TT

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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   80.........90.........100.........110.........120.........130......... 140.........150.....
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Query Sequence  NGQQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDP. . . . QAAALIEPFAISAHAV
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Template Sequence  PGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD
Template Known Secondary structure  TT




S
STT
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  RRAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVI
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Template Sequence  KLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVV
Template Known Secondary structure  TS


TT

STTSTTTT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  DATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYP
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Template Sequence  DHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKP. . VVGQVLP
Template Known Secondary structure  SS
SSSSS


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   241........250.........260.........270.........280.........290.........300.........310. .......
 
   316...320.........330.........
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Query Sequence  FATLAETYERDVINNRELIKGVIT
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Template Sequence  LEAAAEGHRL. LEERRVFGKVVLQ
Template Known Secondary structure  GGG.TT
SSS
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   319320........ .330.........340.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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