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Job DescriptionP39400
Confidence100.00%DateThu Jan 5 12:00:35 GMT 2012
Rank19Aligned Residues330
% Identity17%Templatec2cf5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cinnamyl alcohol dehydrogenase; PDBTitle: crystal structures of the arabidopsis cinnamyl alcohol2 dehydrogenases, atcad5
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10... ......20.........30.........40.........50.........60.........70.........80
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Query Sequence  STMNVLICQQPK. ELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKN
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Template Sequence  RKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV
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STT






TT
T
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   81...... ..90.........100.........110.........120.........130 .........140........
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Query Sequence  GQQVAVI. PYVACQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSVPVAN. . . . . . . . . . . ILPADGIDPQAAALIEPF
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Template Sequence  GDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVT
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S

SSSTT
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TT
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B


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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   149150.........160.........170.........180.........190.........200.........210.........220........
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Query Sequence  AISAHAVRRAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGG
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Template Sequence  VYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELAD. . . .
Template Known Secondary structure  TSTTSTT


ST
SSTTTTS

S
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   168.170.........180.........190.........200.........210.........220.........230.........240...
 
   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  SLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMAEGKITADM
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Template Sequence  . SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSS. .
Template Known Secondary structure  .T


S


STT
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   244.....250.........260.........270.........280.........290.........300.........310.........320
 
   309310.........320.........330.........340
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Query Sequence  MLTHRYPFATLAETYERDVINNRELIKGVITF
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Template Sequence  . IIEVVKMDYVNTAFE. RLEKNDVRYRFVVDV
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GGG.TT
SSST
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   321........330..... ....340.........350
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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