Job Description P39400 Confidence 100.00% Date Thu Jan 5 12:00:35 GMT 2012 Rank 34 Aligned Residues 332 % Identity 20% Template c2cdaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: sulfolobus solfataricus glucose dehydrogenase 1 in complex2 with nadp Resolution 2.28 Å

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		4	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure													.											.
Query SS confidence													.											.
Query Sequence		M	N	V	L	I	C	Q	Q	P	K	E	.	L	V	W	K	Q	R	E	I	P	I	.	P	G	D	N	E	A	L	I	K	I	K	S	V	G	I	C	G	T	D	I	H	A	W	G	G	N	Q	P	F	F	S	Y	P	R	V	L	G	H	E	I	C	G	E	I	V	G	L	G	K	N	I	A	D	L	K	N	G
Query Conservation													.											.
Alig confidence													.											.																															.																				.	.	.
Template Conservation																																																							.																				.	.	.
Template Sequence		M	K	A	I	I	V	K	P	P	N	A	G	V	Q	V	K	D	V	D	E	K	K	L	D	S	Y	G	K	I	K	I	R	T	I	Y	N	G	I	C	G	T	D	R	E	I	V	N	G	K	L	K	G	K	.	D	F	L	V	L	G	H	E	A	I	G	V	V	E	E	S	Y	H	G	.	.	.	F	S	Q	G
Template Known Secondary structure									T	T	S										G	G	G	S				S	S																			T	T						.	S						S							S	S			S	S	.	.	.			T	T
Template Predicted Secondary structure																																																							.																				.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	V	A	V	I	P	Y	V	A	C	Q	Q	C	P	A	C	K	S	G	R	T	N	C	C	E	K	I	S	V	I	.	.	.	G	V	H	Q	D	G	G	F	S	E	Y	L	S	V	P	V	A	N	I	L	P	A	D	G	I	D	P	Q	A	A	A	L	I	E	P	F	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	V	M	P	V	N	R	R	G	C	G	I	C	R	N	C	L	V	G	R	P	D	F	C	E	T	G	E	F	G	E	A	G	I	H	K	M	D	G	F	M	R	E	W	W	Y	D	D	P	K	Y	L	V	K	I	P	K	S	I	E	D	I	G	I	L	A	Q	P	L	A	D	I	E	K	S	I	E	E	I
Template Known Secondary structure								S					S	S	S					T	T		G	G	G		S	S	S						T	T	B					S		B	S						G	G	G						G	G	G	T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
						149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	A	I	S	A	H	A	V	R	R	A	A	I	A	P	G	E	Q	V	L	V	V	G	A	G	P	I	G	L	G	A	A	A	I	A	K	A	D	G	A	Q	V	V	V	A	D	T	S	P	A	R	R	E	H	V	A	T	R	L	E	L	P	L	L	D	P	S	A	E	D	F	D	A	Q	L	R	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		L	E	V	Q	K	R	V	P	V	W	T	C	D	D	G	T	L	N	C	R	K	V	L	V	V	G	T	G	P	I	G	V	L	F	T	L	L	F	R	T	Y	G	L	E	V	W	M	A	N	R	R	E	P	T	E	V	E	Q	T	V	I	E	E	T	K	T	N	Y	Y	N	S	S	N	G	Y	D	K	L	K	D
Template Known Secondary structure					G	G	G	S	S			S		T	T	S	S	S	T	T																						T	T								S	S														T							T	T		S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		Q	F	G	G	S	L	A	Q	K	V	I	D	A	T	G	N	Q	H	A	M	N	N	T	V	N	L	I	R	H	G	G	T	V	V	F	V	G	L	F	K	G	E	.	.	.	.	L	Q	F	S	D	P	E	F	H	K	K	E	T	T	M	M	G	S	R	N	A	T	P	E	D	F	A	K	V	G	R	L	M	A
Query Conservation																																												.	.	.	.
Alig confidence					.																																							.	.	.	.
Template Conservation					.
Template Sequence		S	V	G	.	K	F	D	V	I	I	D	A	T	G	A	D	V	N	I	L	G	N	V	I	P	L	L	G	R	N	G	V	L	G	L	F	G	F	S	T	S	G	S	V	P	L	D	Y	K	T	L	Q	E	I	V	H	T	N	K	T	I	I	G	L	V	N	G	Q	K	P	H	F	Q	Q	A	V	V	H	L	A
Template Known Secondary structure			T		.												B	T							G	G	G											S				B																T	T
Template Predicted Secondary structure					.
Template SS confidence
		243	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		301	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		E	G	K	I	.	.	.	.	T	A	D	M	M	L	T	H	R	Y	P	F	A	T	L	A	E	T	Y	E	R	D	V	I	N	N	R	E	L	I	K	G	V	I	T	F
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		S	W	K	T	L	Y	P	K	A	A	K	M	L	I	T	K	T	V	S	I	N	D	E	K	E	L	L	K	V	L	R	E	K	E	H	G	E	I	K	I	R	I	L	W
Template Known Secondary structure							S					T	T	S							T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions