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Job DescriptionP39400
Confidence100.00%DateThu Jan 5 12:00:35 GMT 2012
Rank40Aligned Residues306
% Identity15%Templatec1wlyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:2-haloacrylate reductase; PDBTitle: crystal structure of 2-haloacrylate reductase
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10... ......20.........30.........40.........50.........60.........70.........80
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Query Sequence  MNVLICQQPK. . . ELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKN
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Template Sequence  VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAP. . . . . . . PIVVGFEAAAVVEEVGPGVTDFTV
Template Known Secondary structure 
SS
SSGGG






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   2.......10.........20.........30.........40.........50 .........60.........70....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  GQQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAI
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Template Sequence  GERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHL. . . . . . . . . . . . . . . . . . . . AGLMLKGMTAQYLLHQTHKVK
Template Known Secondary structure  T

SSS


SBSGGG


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   85....90.........100.........110.........120... ......130.........140....
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  APGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVIDATGN
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Template Sequence  PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK
Template Known Secondary structure  TT
TTTTSTTTT
SST
STTTS
TT


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   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   241........250.........260.........270.........280........ .290.........300.........310
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Query Sequence  QHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNAT. . . . . . . . . . PEDFAKVGRLMAEGKITADMML
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Template Sequence  DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHS. . SV
Template Known Secondary structure  TTT


TT






TTTTTS



GGGGS
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   225....230.........240.........250.........260.........270.........280.........290.........300 ..
 
   311........320.........330.........
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Query Sequence  THRYPFATLAETYERDVINNRELIKGVIT
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Template Sequence  AKTFPLREAAAAHK. YMGGRQTIGSIVLL
Template Known Secondary structure  GGG.
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   303......310...... ...320.........330
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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