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Job DescriptionP39400
Confidence100.00%DateThu Jan 5 12:00:35 GMT 2012
Rank32Aligned Residues322
% Identity24%Templatec1uufA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:zinc-type alcohol dehydrogenase-like protein PDBTitle: crystal structure of a zinc-type alcohol dehydrogenase-like2 protein yahk
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.... .....20.........30.........40.........50.........60.........70.........80..
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Query Sequence  MNVLICQQPKE. LVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKNGQ
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Template Sequence  IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD
Template Known Secondary structure 
BSSTTS








TT


TTS


SSB





TT

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TT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   83.... ..90.........100.........110.........120...... ...130.........140.........150
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Query Sequence  QVAVI. PYVACQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSV. . . . . . . . . . . PVANILPADGIDPQAAALIEPFAI
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Template Sequence  LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGIT
Template Known Secondary structure 
S

SSSTT
GGG
TT
TTTSB
SSTTSB


SSBSGGG


S
GGGGGGGT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  SAHAVRRAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSL
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Template Sequence  TYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMA. . . . . AHLKS
Template Known Secondary structure  TT

TT


STT
SSGGGT
STT
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   163......170.........180.........190.........200.........210.........220.........230.. .....
 
   231........240.........250.........260.........270.........280.........290.........300.........310
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Query Sequence  AQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMAEGKITADMML
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Template Sequence  FDFILNTVAAPHNLDDFTTLLKRDGTMTLVG. . . . . . APEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVA. . . D
Template Known Secondary structure 

SS


TT

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   238.240.........250.........260........ .270.........280.........290.........300....... .
 
   311........320.........330.........340
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Query Sequence  THRYPFATLAETYERDVINNRELIKGVITF
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Template Sequence  IEMIRADQINEAYE. RMLRGDVKYRFVIDN
Template Known Secondary structure 
GGG.TT
SSSG
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   316...320......... 330.........340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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