Job Description P39400 Confidence 100.00% Date Thu Jan 5 12:00:35 GMT 2012 Rank 4 Aligned Residues 336 % Identity 31% Template c1pl6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sorbitol dehydrogenase; PDBTitle: human sdh/nadh/inhibitor complex Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		S	T	M	N	V	L	I	C	Q	Q	P	K	E	L	V	W	K	Q	R	E	I	P	I	P	G	D	N	E	A	L	I	K	I	K	S	V	G	I	C	G	T	D	I	H	A	W	G	G	N	Q	P	F	.	.	.	F	S	Y	P	R	V	L	G	H	E	I	C	G	E	I	V	G	L	G	K	N	I	A	D	L
Query Conservation																																																						.	.	.
Alig confidence																																																						.	.	.
Template Conservation
Template Sequence		P	N	N	L	S	L	V	V	H	G	P	G	D	L	R	L	E	N	Y	P	I	P	E	P	G	P	N	E	V	L	L	R	X	H	S	V	G	I	C	G	S	D	V	H	Y	W	E	Y	G	R	I	G	N	F	I	V	K	K	P	X	V	L	G	H	E	A	S	G	T	V	E	K	V	G	S	S	V	K	H	L
Template Known Secondary structure												T	T														T	T																						S			T	T					S																	T	T			S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																									.																		.
Query SS confidence																																									.																		.
Query Sequence		K	N	G	Q	Q	V	A	V	I	P	Y	V	A	C	Q	Q	C	P	A	C	K	S	G	R	T	N	C	C	E	K	I	S	V	I	G	V	H	Q	D	.	G	G	F	S	E	Y	L	S	V	P	V	A	N	I	L	P	A	.	D	G	I	D	P	Q	A	A	A	L	I	E	P	F	A	I	S	A	H	A	V	R
Query Conservation																																									.																		.
Alig confidence																																									.																		.
Template Conservation
Template Sequence		K	P	G	D	R	V	A	I	E	P	G	A	P	R	E	N	D	E	F	C	K	X	G	R	Y	N	L	S	P	S	I	F	F	C	A	T	P	P	D	D	G	N	L	C	R	F	Y	K	H	N	A	A	F	C	Y	K	L	P	D	N	V	T	F	E	E	G	A	L	I	E	P	L	S	V	G	I	H	A	C	R
Template Known Secondary structure			T	T							S				S	S							T	T		G	G	G		T	T				T	T	S	T	T	S					B	S						G	G	G						T	T	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.
Predicted Secondary structure																																	.																																												.	.
Query SS confidence																																	.																																												.	.
Query Sequence		R	A	A	I	A	P	G	E	Q	V	L	V	V	G	A	G	P	I	G	L	G	A	A	A	I	A	K	A	D	G	A	.	Q	V	V	V	A	D	T	S	P	A	R	R	E	H	V	A	T	R	L	E	L	P	L	L	D	P	S	A	E	D	F	D	A	Q	L	R	A	Q	F	G	G	S	L	.	.	A	Q	K
Query Conservation																																	.																																												.	.
Alig confidence																																	.																																												.	.
Template Conservation
Template Sequence		R	G	G	V	T	L	G	H	K	V	L	V	C	G	A	G	P	I	G	X	V	T	L	L	V	A	K	A	X	G	A	A	Q	V	V	V	T	D	L	S	A	T	R	L	S	K	A	K	E	I	G	A	D	L	V	L	Q	I	S	K	E	S	P	Q	E	I	A	R	K	V	E	G	Q	L	G	C	K	P	E	V
Template Known Secondary structure				T			T	T									S													T	T		S							S											T	T		S						S	S															T	S			S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	D	A	T	G	N	Q	H	A	M	N	N	T	V	N	L	I	R	H	G	G	T	V	V	F	V	G	L	F	K	G	E	L	Q	F	S	D	P	E	F	H	K	K	E	T	T	M	M	G	S	R	N	A	T	P	E	D	F	A	K	V	G	R	L	M	A	E	G	K	I	T	A	D	M	M	L	T	H	R
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		T	I	E	C	T	G	A	E	A	S	I	Q	A	G	I	Y	A	T	R	S	G	G	T	L	V	L	V	G	L	G	S	E	X	T	T	V	P	L	L	H	A	A	I	R	E	V	D	I	K	G	V	F	R	Y	C	.	N	T	W	P	V	A	I	S	X	L	A	S	K	S	V	N	V	K	P	L	V	T	H	R
Template Known Secondary structure						S													S		T	T							S				S	S										T	T	T								S		S	.	S											T	T	S				G	G	G
Template Predicted Secondary structure																																																									.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	F	A	T	L	A	E	T	Y	E	R	D	V	I	N	N	R	E	L	I	K	G	V	I	T	F
Query Conservation
Alig confidence														.							.
Template Conservation														.							.
Template Sequence		F	P	L	E	K	A	L	E	A	F	E	T	.	F	K	K	G	L	G	.	L	K	I	X	L	K	C
Template Known Secondary structure				G	G	G								.			T	T		S	.	S
Template Predicted Secondary structure														.							.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.		.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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