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Job DescriptionP39400
Confidence100.00%DateThu Jan 5 12:00:35 GMT 2012
Rank12Aligned Residues337
% Identity20%Templatec1cdoB_
PDB info PDB header:oxidoreductase (ch-oh(d)-nad(a))Chain: B: PDB Molecule:alcohol dehydrogenase; PDBTitle: alcohol dehydrogenase (e.c.1.1.1.1) (ee isozyme) complexed with2 nicotinamide adenine dinucleotide (nad), and zinc
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10... ......20.........30.........40.........50.........60.........70.........
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Query Sequence  MSTMNVLICQQPK. ELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLK
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Template Sequence  VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQ
Template Known Secondary structure 
B
STTS





TT




GGG
S




TT

S

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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   80.........90.........100.........110...... ...120.........130........
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Query Sequence  NGQQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQ. . . . . . . . . . . . . . . . . . . . . DGGFSEYLSVPVANILPADGID
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Template Sequence  PGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSA
Template Known Secondary structure  TT

SS


SSSTTTT
TT



S
S
TTTTS
S


TT
GGGT

SBSGGG

TT
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   139140........ .150.........160.........170.........180.........190.........200.........210....
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Query Sequence  PQAAALIEPF. . . . AISAHAVRRAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPS
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Template Sequence  PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN
Template Known Secondary structure 
GGGGTTTT


TT


ST
S
S
GGGT


GG
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   215....220. ........230.........240.........250.........260.........270.........280........ .
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Query Sequence  AEDFDAQ. . LRAQFGGSLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNAT. . . P
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Template Sequence  DHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGK
Template Known Secondary structure  G
SS
TS
BS
S

TB
TTT

S


SS




TT

SGGG

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   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   290.........300.........310.........320.........330.........
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Query Sequence  EDFAKVGRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELIKGVIT
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Template Sequence  DGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAID. LMKHGKC. IRTVLS
Template Known Secondary structure  TTSS

GGGGGG.TT

.S
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   326...330.........340.........350.........360 ....... ..370...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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