 |
Job Description | P0ACK5 | Confidence | 95.03% | Date | Wed Jan 25 15:20:23 GMT 2012 |
Rank | 171 | Aligned Residues | 45 |
% Identity | 11% | Template | d3deua1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 2.30 |
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | Q | L | L | Q | E | L | K | R | S | D | K | . |
L | H | L | K | D | A | A | A | L | L | G | V | S | E | M | T | I | R | R | D | L | N | N | H | S | A | P | V | V | L | L | G |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |
|   | . |
|   |
|   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|
Template Sequence |   |
H | W | V | T | L | H | N | I | H | Q | L | P | P | D | Q | S | Q | I | Q | L | A | K | A | I | G | I | E | Q | P | S | L | V | R | T | L | D | Q | L | E | D | K | G | L | I | S | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S |
| S | S |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|