 |
Job Description | P0ACK5 | Confidence | 86.20% | Date | Wed Jan 25 15:20:23 GMT 2012 |
Rank | 312 | Aligned Residues | 36 |
% Identity | 19% | Template | d2gfna1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
Resolution | 1.90 |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | |
|
|
|
. | . | . | . | . | 20 | |
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | E | R | I | G | Q | L | L | Q | . |
. |
. |
. |
E | L | K | R | S | D | . |
. |
K | L | H | L | K | D | A | A | A | L | L | G | V | S | E | M | T | I | R | R |
Query Conservation |   |
  |
|
|
|   |   |   |
|
|   | . | . | . | . |   |
|   |   |   |
| . | . |   |
|   |
|   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |
Template Sequence |   |
H | D | E | R | R | R | A | L | A | D | A | V | L | A | L | I | A | R | E | G | I | S | A | V | T | T | R | A | V | A | E | E | S | G | W | S | T | G | V | L | N | H |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |
|
|  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|