Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK5
Confidence95.47%DateWed Jan 25 15:20:23 GMT 2012
Rank151Aligned Residues84
% Identity11%Templated2etha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 
















Query SS confidence 















































































Query Sequence  IGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAAT
Query Conservation     

  
   
 
 
 


  
 

  





  

  
    
                
       
  

  
  
Alig confidence 















































































Template Conservation 
  

  
      
  


         

  
  
   


 
     
 
   
 

  
                 
Template Sequence  ELYAFLYVALFGPKKXKEIAEFLSTTKSNVTNVVDSLEKRGLVVREXDPVDRRTYRVVLTEKGKEIFGEILSNFESLLKS
Template Known Secondary structure 

B
TTS
TTS
TTTSS

Template Predicted Secondary structure 


















Template SS confidence 















































































   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   8990..
Predicted Secondary structure 


Query SS confidence 



Query Sequence  LVEP
Query Conservation 

  
Alig confidence 



Template Conservation      
Template Sequence  VLEK
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 



   114...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions