Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK5
Confidence94.82%DateWed Jan 25 15:20:23 GMT 2012
Rank180Aligned Residues81
% Identity14%Templated2a61a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 
















Query SS confidence 















































































Query Sequence  IGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAAT
Query Conservation     

  
   
 
 
 


  
 

  





  

  
    
                
       
  

  
  
Alig confidence 















































































Template Conservation      
  
      
  


  
      

  
  
   


 
     
 
   
 

  
                 
Template Sequence  QFDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVIERRENFIEK
Template Known Secondary structure 

B
T

TTSTT
Template Predicted Secondary structure 
















Template SS confidence 















































































   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   89
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  I
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   116
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions