Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK5
Confidence78.77%DateWed Jan 25 15:20:23 GMT 2012
Rank408Aligned Residues88
% Identity11%Templated1ybha3
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120. ........130. ........140.........150
Predicted Secondary structure 











........

.









Query SS confidence 









































. . . . . . . .









.


















Query Sequence  RRAAKLAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAVC. . . . . . . . YSLNTFLALK. EKPHCRAFLCGGEFHASNA
Query Conservation    

  
  

  
  



 


   

  
     




........


  
  
 .      
   

       
Alig confidence 









































........









.











....


Template Conservation        
   
    


 
 
                          

  
 





 
     

 
 
....

 
Template Sequence  QYAIKVLDELTDGKAIISTGVGQHQMWAAQFYNYKKPRQWLSSGGLGAMGFGLPAAIGASVANPDAIVVDIDG. . . . DGS
Template Known Secondary structure  TTT


SSS


SSTTS


SS

TT

TTS
....
Template Predicted Secondary structure 























....
Template SS confidence 















































































   465....470.........480.........490.........500.........510.........520.........530....... ..540
 
   151........160.........170.
Predicted Secondary structure 




Query SS confidence 




















Query Sequence  IFKPIDFQQTLNNFCPDIAFY
Query Conservation     
  
   
     
 


Alig confidence 




















Template Conservation 
     

 

    


  
Template Sequence  FIMNVQELATIRVENLPVKVL
Template Known Secondary structure  TTTTT

Template Predicted Secondary structure 






Template SS confidence 




















   541........550.........560.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions