 |
Job Description | P0ACK5 | Confidence | 86.64% | Date | Wed Jan 25 15:20:23 GMT 2012 |
Rank | 307 | Aligned Residues | 38 |
% Identity | 18% | Template | d1ui5a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
Resolution | 2.40 |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | |
|
|
|
. | . | . | . | . | . | . | 20 | |
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | R | E | E | R | I | G | Q | L | . |
. |
. |
. |
L | Q | E | L | K | R | S | D | . |
. |
K | L | H | L | K | D | A | A | A | L | L | G | V | S | E | M | T | I | R | R |
Query Conservation |   |
  |   |   |
|
|
|   |   |   |
| . | . | . | . |
|   |   |
|   |   |   |
| . | . |   |
|   |
|   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |   |   |
|   |
Template Sequence |   |
L | R | A | E | Q | T | R | A | T | I | I | G | A | A | A | D | L | F | D | R | R | G | Y | E | S | T | T | L | S | E | I | V | A | H | A | G | V | T | K | G | A | L | Y | F |
Template Known Secondary structure |   |
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|