Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK5
Confidence88.07%DateWed Jan 25 15:20:23 GMT 2012
Rank282Aligned Residues47
% Identity26%Templatec3iwzB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:catabolite activation-like protein; PDBTitle: the c-di-gmp responsive global regulator clp links cell-cell signaling2 to virulence gene expression in xanthomonas campestris
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20. ........30.........40.........50..
Predicted Secondary structure 


...........




Query SS confidence 















. . . . . . . . . . .






























Query Sequence  EERIGQLLQELKRSDK. . . . . . . . . . . LHLKDAAALLGVSEMTIRRDLNNHSAPVVLL
Query Conservation 


   

  
   
 ...........
 
 


  
 

  





  

  
   
Alig confidence 















...........






























Template Conservation    
    
  
                 
   

  

 

 

 
 
  
   


 
Template Sequence  TDRIVRTLHDLSKEPEAMSHPQGTQLRVSRQELARLVGCSREMAGRVLKKLQADGLLH
Template Known Secondary structure  TTSTT


BTTB


TS
TTS
Template Predicted Secondary structure 














Template SS confidence 

























































   161........170.........180.........190.........200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions