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Job DescriptionP0ACK5
Confidence98.14%DateWed Jan 25 15:20:23 GMT 2012
Rank25Aligned Residues162
% Identity13%Templatec3ecsD_
PDB info PDB header:translationChain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90..... ....100.........110. ........120. ........130.........
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Query Sequence  SDQKSRLVEEKRRAAKLAATLVEPDQT. LFFDCGTTTPWIIEAI. DNEIPFTAVC. . . . . . . YSLNTFLALKEKPHCRAF
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Template Sequence  ELFLRRISLSRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKXAKALCHL. NVPVT
Template Known Secondary structure  TT

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TTTTTT.T

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   98.100.........110.........120.........130.........140.........150.........160.........170. .....
 
   140.........150.........160.........170.........180.........190.........200.........210......
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Query Sequence  LCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVR. . .
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Template Sequence  V. . . . . . . . . . . VLDAAVGYIXEK. . ADLVIVGAEGVVENGGIINKI. GTNQXAVCAKAQNKPFYVVAESFKFVRLFPLN
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GGGGGG..
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TTS
T.TTT



GGGB
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   177 ..180......... 190.........200.........210 .........220.........230.........240..
 
   217..220.........230... ......240.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . PARMGDLKRFDIVVSDC. . CPEDEYVKYAQT
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Template Sequence  QQDVPDKFKYKADGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDELIK
Template Known Secondary structure  GGGS
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GGG
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   243......250.........260.........270.........280.........290.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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