Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK5
Confidence96.63%DateWed Jan 25 15:20:23 GMT 2012
Rank86Aligned Residues92
% Identity16%Templatec3c7jA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of transcriptional regulator (gntr family member)2 from pseudomonas syringae pv. tomato str. dc3000
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10........ .20.........30.........40.........50. ........60.........70
Predicted Secondary structure 


.........







.








Query SS confidence 

















. . . . . . . . .
































.


















Query Sequence  METRREERIGQLLQELKR. . . . . . . . . SDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVL. LGGYIVLEPRSASHYLLSD
Query Conservation 
    


   

  
  ......... 
 
 
 


  
 

  





  

  
  .  
                
Alig confidence 

















.........
































.


















Template Conservation             

  
   
  
 
 

  
 
  

   



 





  
  



      
  
          
Template Sequence  EQPPAHLARTVIEEKLRNAIIDGSLPSGTALRQQELATLFGVSRXPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVD
Template Known Secondary structure 



GGGTSSS
TT
B

TS
TTSTTT


Template Predicted Secondary structure 





























Template SS confidence 















































































   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   71........80.........90..
Predicted Secondary structure 


Query SS confidence 





















Query Sequence  QKSRLVEEKRRAAKLAATLVEP
Query Conservation 
       
  

  
  

  
Alig confidence 





















Template Conservation                        
Template Sequence  AYALRILLESEALRLSIPLLDA
Template Known Secondary structure  GGG

Template Predicted Secondary structure 


Template SS confidence 





















   97..100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions