Job Description P0ACK5 Confidence 98.50% Date Wed Jan 25 15:20:23 GMT 2012 Rank 20 Aligned Residues 216 % Identity 13% Template c2w48D_ PDB info PDB header:transcription Chain: D: PDB Molecule:sorbitol operon regulator; PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae Resolution 3.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.													.
Predicted Secondary structure																																																.																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	R	I	G	Q	L	L	Q	E	L	K	R	S	D	K	L	H	L	K	D	A	A	A	L	L	G	V	S	E	M	T	I	R	R	D	L	N	N	H	S	A	P	V	V	L	.	L	G	G	Y	I	V	L	E	P	R	S	A	S	H	Y	L	L	S	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	K
Query Conservation																																																.																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	R	L	I	V	K	I	A	Q	L	Y	Y	E	Q	D	M	T	Q	A	Q	I	A	R	E	L	G	I	Y	R	T	T	I	S	R	L	L	K	R	G	R	E	Q	G	I	V	T	I	A	I	N	Y	D	Y	N	E	N	L	W	L	E	Q	Q	L	K	Q	K	F	G	L	K	E	A	V	V	A	S	S	D	G
Template Known Secondary structure		T														S												T			S													T	T	S	S						T	T																T		S								S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																																			.
Query SS confidence																			.	.	.	.																																																			.
Query Sequence		S	R	L	V	E	E	K	R	R	A	A	K	L	A	A	T	L	.	.	.	.	V	E	P	D	Q	T	L	F	F	D	C	G	T	T	T	P	W	I	I	E	A	I	D	N	E	I	P	F	T	A	V	C	Y	S	L	N	T	F	L	A	L	K	E	K	P	H	C	R	A	F	.	L	C	G	G	E	F	H	A
Query Conservation																			.	.	.	.																																																			.
Alig confidence																			.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	E	E	E	Q	L	S	A	M	G	Q	H	G	A	L	L	V	D	R	L	L	E	P	G	D	I	I	G	F	S	W	G	R	A	V	R	S	L	V	E	N	L	P	Q	R	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	Q	V	I	C	V	P	I	I	G	G	P	S	G	K
Template Known Secondary structure																									T	T								S									T					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	B		B		T	T	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		148	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		S	N	A	I	F	.	K	P	I	D	F	Q	Q	T	L	N	N	F	C	P	D	I	A	F	Y	S	A	A	G	V	H	V	S	K	G	A	T	C	F	N	L	E	E	L	P	V	K	H	W	A	M	S	M	A	Q	K	H	V	L	V	V	D	H	S	K	F	G	K	V	R	P	A	R	M	G	D	L	K	R	F
Query Conservation							.
Alig confidence							.																																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	S	R	Y	H	V	N	T	L	T	Y	G	A	A	A	R	L	K	A	E	S	H	L	A	D	F	P	A	L	L	D	N	P	L	I	R	N	G	I	M	Q	S	Q	H	F	K	T	I	S	S	Y	W	D	S	L	D	V	.	.	.	.	.	.	.	.	.	.	.	A	L	V	G	I	G	S	P	A	I	R
Template Known Secondary structure		S		G	G	G														T								S	B	S	B		S										T	S											T	T				.	.	.	.	.	.	.	.	.	.	.						B		T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.												.	.	210	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	V	S	D	C	C	P	E	D	E	Y	V	K	Y	A	Q	T	Q	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	A	N	W	H	A	F	Y	G	S	E	E	S	D	D	L	N	A	R	H	V
Template Known Secondary structure		S	S	S						T	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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