Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK5
Confidence94.97%DateWed Jan 25 15:20:23 GMT 2012
Rank176Aligned Residues46
% Identity17%Templatec2qufB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcription factor pf0095; PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50...
Predicted Secondary structure 







Query SS confidence 














































Query Sequence  ERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLG
Query Conservation 

   

  
   
 
 
 


  
 

  





  

  
    
Alig confidence 











.

































Template Conservation    
  

  
  .      


  
  
   
   
  
   


  
Template Sequence  KVRRDLLSHLTA. MEAYFSLLSSKVSVSSTAVAKHLKIMEREGVLQS
Template Known Secondary structure  T
.TTT
SSSS
SSS


TTTS
Template Predicted Secondary structure 
.









Template SS confidence 














































   12.......20... ......30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions