|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | E | V | M | I | P | E | A | E | I | K | A | R | I | A | E | L | G | R | Q | I | T | E | R | Y | K | D | S | G | S | D | M | V | L | V | G | L | L | R | G | S | F | M | F | M | A | D | L | C | R | E | V | Q | . |
. |
. |
. |
V | S | H | E | V | D | F | M | T | A | S | S | Y | G | S | G | M | S | T | T | R | D |
Query Conservation |   |
  |   |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   | . | . | . | . | . |   |   |   |
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |
Template Sequence |   |
Q | K | A | V | I | L | D | E | Q | A | I | R | R | A | L | T | R | I | A | H | E | M | I | E | R | . |
. |
. |
. |
. |
N | K | C | I | L | V | G | I | K | T | R | G | I | Y | L | A | K | R | L | A | E | R | I | E | Q | I | E | G | N | P | V | T | V | G | E | I | D | I | T | L | Y | . |
. |
. |
. |
R | N | D | E | P |
Template Known Secondary structure |   |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
. | 70 | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
|
|
150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
V | K | I | L | K | D | L | D | E | D | I | R | G | K | D | V | L | I | V | E | D | I | I | D | S | G | N | T | L | S | K | V | R | E | I | L | S | L | R | E | . |
P | K | S | L | A | I | C | T | L | L | D | K | P | S | R | R | E | V | N | V | P | V | E | F | I | G | F | S | I | P | . |
. |
. |
D | E | F | V | V | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
| . |
|   |   |
|   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|
| . | . | . |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |
|
|
|   |
|
|   | . |   |
|   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
L | V | K | G | A | D | I | P | V | D | I | T | D | Q | K | V | I | L | V | D | D | V | L | Y | T | G | R | T | V | R | A | G | M | D | A | L | V | D | V | G | R | P | S | S | I | Q | L | A | V | L | V | D | R | G | . |
H | R | E | L | P | I | R | A | D | Y | I | G | K | N | I | P | T | S | K | S | E | K | V | M | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S |
|
| T | T | S |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S |  |  |  |  |  |  |  |  |  |
|
| . |
|
| S | S | S |
|
|
| S |  |  |  |  |  |
|
|
|
| S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
  |
  |   |
156 | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | I | D | Y | A | Q | R | Y | R |
Query Conservation |   |
|
|
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | L | D | E | V | D | Q | N | D | L |
Template Known Secondary structure |   |
 |
|  |  |  |  | S | S |
|  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
165 | . | . | . | . | 170 | . | . | . | . |
  |