Job Description P0A9M2 Confidence 23.92% Date Thu Jan 5 11:10:43 GMT 2012 Rank 113 Aligned Residues 112 % Identity 13% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.											.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	I	K	A	R	I	A	E	L	G	R	Q	I	T	E	R	Y	K	D	S	G	S	D	M	V	L	V	G	L	L	R	G	S	F	M	F	M	A	D	L	C	R	E	V	Q	V	S	H	E	V	D	F	M	T	A	S	S	Y	G	S	G	.	.	.	.	.	.	.	.	.	.	M	S	T	T	R	D	V	K
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.
Alig confidence																							.									.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																							.									.
Template Sequence		E	A	L	P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	.	N	K	I	L	C	C	G	N	.	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V
Template Known Secondary structure				S																	T	T	.								S	.	T															T		S	S	S										S	S										T	T	S	T	T	G	G	G	T
Template Predicted Secondary structure																							.									.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	K	D	L	D	E	D	I	R	G	K	D	V	L	I	V	E	D	I	I	D	S	G	N	T	L	S	K	V	R	E	I	L	S	L	R	E	P	K	S	L	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L
Template Known Secondary structure		T										T	T								S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions