Job Description P32712 Confidence 96.36% Date Thu Jan 5 11:50:34 GMT 2012 Rank 113 Aligned Residues 99 % Identity 12% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Q	Q	T	P	E	A	Q	L	Q	A	L	Q	D	K	I	R	A	N	P	Q	N	S	E	Q	W	A	L	L	G	E	Y	Y	L	W	Q	N	D	Y	S	N	S	L	L	A	Y	R	Q	A	L	Q	L	R	G	E	N	A	E	L	Y	A	A	L	A	T	V	L	Y	Y	Q	A	S	Q	H	M	T	A	Q	T
Query Conservation
Alig confidence																		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	Y	G	N	L	D	A	A	L	D	E	A	K	K	L	.	.	.	.	.	N	D	S	I	T	W	E	R	L	I	Q	E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	H	S	F	D	.	.	.	.	.	.	.	.	.	.	.	K	L	S	F	L	Y	L	V	T	G	D	V	N	K	L
Template Known Secondary structure				T	T													.	.	.	.	.																T	T												T	T				.	.	.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure																		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.						.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.												.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	M	I	D	K	A	L	A	L	D	S	N	E	I	T	A	L	M	L	L	A	S	D	A	F	M	Q	A	N	Y	A	Q	A	I	E	L	W	Q	K
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		S	K	M	Q	N	I	A	Q	T	R	E	D	F	G	S	M	L	L	N	T	F	Y	.	.	.	.	.	N	N	S	T	K	E	R	S	S	I	F	A	E
Template Known Secondary structure											T	T												.	.	.	.	.		T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.						.	.	.	.	.	.	.	750	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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