Job Description P32712 Confidence 94.98% Date Thu Jan 5 11:50:34 GMT 2012 Rank 116 Aligned Residues 109 % Identity 8% Template c3mkqA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:coatomer beta'-subunit; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		D	P	L	H	Q	F	A	S	Q	Q	T	P	E	A	Q	L	Q	A	L	Q	D	.	.	.	.	.	.	.	.	K	I	R	A	N	P	Q	N	S	E	Q	W	A	L	L	G	E	Y	Y	L	W	Q	N	D	Y	S	N	S	L	L	A	Y	R	Q	A	L	Q	L	R	G	E	N	A	E	L	Y	A	A	L	A	T
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	G	D	A	S	L	Q	R	F	N	F	K	L	A	I	E	A	F	T	N	A	H	D	L	E	S	L	F	L	L	H	S	S	F	N	N	K	E	G	L	V	T	L	A	K	D	A	E	T	T	G	K	F	N	L	A	F	N	A	Y	W	I	A	G	D	I	Q	.	.	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure										T	T													T												T	T															T	T													T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.												.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	Y	Y	Q	A	S	Q	H	M	T	A	Q	T	R	A	M	I	D	K	A	L	A	L	D	S	N	E	I	T	A	L	M	L	L	A	S	D	A	F	M	Q	A	N	Y	A	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	D	L	L	I	K	S	Q	R	F	S	E	A	A	F	L	G	S	T	Y	G	L	G	D	N	E	V	N	D	I	V	T	K	W	K	E	N	L	I	L	N	G	K	N	T	V	S
Template Known Secondary structure									T	T												T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		755	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions