Job Description P32712 Confidence 76.14% Date Thu Jan 5 11:50:34 GMT 2012 Rank 120 Aligned Residues 115 % Identity 16% Template c3lpzA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:get4 (yor164c homolog); PDBTitle: crystal structure of c. therm. get4 Resolution 1.98 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																																		.	.
Query SS confidence																		.	.	.	.	.																																		.	.
Query Sequence		Q	T	P	E	A	Q	L	Q	A	L	Q	D	K	I	R	A	.	.	.	.	.	N	P	Q	N	S	E	Q	W	A	L	L	G	E	Y	Y	L	W	Q	N	D	Y	S	N	S	L	L	A	Y	R	Q	A	L	Q	.	.	L	R	G	E	N	A	E	L	Y	A	A	L	A	T	V	L	Y	Y	Q	A	S	Q	H	M
Query Conservation																		.	.	.	.	.																																		.	.
Alig confidence																		.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		N	K	I	E	R	I	I	A	R	L	Q	R	R	I	A	E	G	Q	P	E	E	Q	Y	E	A	A	Q	E	T	R	L	V	A	A	R	Y	S	K	Q	G	N	W	A	A	A	V	D	I	L	A	S	V	S	Q	T	L	L	R	S	G	Q	G	G	S	G	G	D	L	A	V	L	L	V	D	T	F	R	Q	A	G
Template Known Secondary structure																																								T	T																			T	T																				T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																													.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	Q	T	R	A	M	I	D	K	A	L	A	L	D	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	T	A	L	M	L	L	A	S	D	A	F	M	Q	A	N	Y	A	Q	A	I	E	L	W
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	V	D	G	A	S	R	G	K	L	L	G	C	L	R	L	F	Q	P	G	E	P	V	R	K	R	F	V	K	E	M	I	D	W	S	K	K	F	G	D	Y	P	A	G	D	P	E	L	H	H	V	V	G	T	L	Y	V	E	E	G	E	F	E	A	A	E	K	H	L
Template Known Secondary structure																	T	T	S		T	T																			S	S		T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions