Job Description P32712 Confidence 59.89% Date Thu Jan 5 11:50:34 GMT 2012 Rank 129 Aligned Residues 50 % Identity 12% Template c3lewA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:susd-like carbohydrate binding protein; PDBTitle: crystal structure of susd-like carbohydrate binding protein2 (yp_001298396.1) from bacteroides vulgatus atcc 8482 at 1.70 a3 resolution Resolution 1.70 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.												.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	T	P	E	A	Q	L	Q	A	L	Q	D	K	I	R	A	N	P	Q	N	.	.	.	.	.	.	.	.	.	.	.	S	E	Q	W	A	L	L	G	E	Y	Y	L	W	Q	N	D	Y	S	N	S	L	L	A	Y	R	Q	A	L	Q
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	V	Y	A	Q	S	I	N	D	L	E	E	A	L	E	L	I	P	E	T	Y	V	R	D	A	K	H	K	I	D	N	E	V	V	L	G	I	L	S	R	A	C	L	Y	A	R	Q	W	E	K	A	K	T	Y	S	D	K	L	L	A
Template Known Secondary structure																			S		T	T				S	S	T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions