Job Description P32712 Confidence 66.07% Date Thu Jan 5 11:50:34 GMT 2012 Rank 126 Aligned Residues 109 % Identity 11% Template c3kaeC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:possible protein of nuclear scaffold; PDBTitle: cdc27 n-terminus Resolution 2.30 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	P	L	H	Q	F	A	S	Q	Q	T	P	E	A	Q	L	Q	A	L	Q	D	K	I	R	A	N	P	Q	N	S	E	Q	W	A	L	L	G	E	Y	Y	L	W	Q	N	D	Y	S	N	S	L	L	A	Y	R	Q	A	L	Q	L	R	G	E	N	A	E	L	Y	A	A	L	A	T	V	L	Y	Y	Q	A	S
Query Conservation
Alig confidence																						.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	M	S	I	V	L	Y	L	N	G	E	Y	T	R	A	L	F	H	L	.	.	.	.	.	H	K	L	N	T	C	T	S	K	Y	Y	E	S	L	C	Y	K	K	K	K	D	Y	K	K	A	I	K	S	L	E	S	I	L	E	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T										.	.	.	.	.		T			B														T	T														T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	M	T	A	Q	T	R	A	M	I	D	K	A	L	A	L	D	S	N	E	I	T	A	L	M	L	L	A	S	D	A	F	M	Q	A	N	Y	A	Q	A	I	E	L	W	Q	K	V	M	D	L	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	R	D	P	D	V	D	A	R	I	Q	E	M	F	V	D	P	G	D	E	E	F	F	E	S	L	L	G	D	L	C	T	L	S	G	Y	R	E	E	G	I	G	H	Y	V	R	S	F	G	K	S	F
Template Known Secondary structure		S	B											T	T	S			T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions