Job Description P32712 Confidence 99.71% Date Thu Jan 5 11:50:34 GMT 2012 Rank 28 Aligned Residues 135 % Identity 17% Template c3as5A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:mama; PDBTitle: mama amb-1 p212121 Resolution 2.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		R	D	P	L	H	Q	F	A	S	Q	Q	T	P	E	A	Q	L	Q	A	L	Q	D	K	I	R	A	N	P	Q	N	S	E	Q	W	A	L	L	G	E	Y	Y	L	W	Q	N	D	Y	S	N	S	L	L	A	Y	R	Q	A	L	Q	L	R	G	E	N	A	E	L	Y	A	A	L	A	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	K	G	I	S	H	A	K	A	G	R	Y	S	Q	A	V	M	L	L	E	Q	V	Y	D	A	D	A	F	D	V	D	V	A	L	H	L	G	I	A	Y	V	K	T	G	A	V	D	R	G	T	E	L	L	E	R	S	L	A	D	A	P	D	N	V	K	V	A	T	V	L	G	L	T	Y	V	Q	V	Q	K
Template Known Secondary structure												T										T	T	T			T	T	S																T	T																	T	T																T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
																									115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	L	Y	Y	Q	A	S	Q	H	M	T	A	Q	T	R	A	M	I	D	K	A	L	A	L	D	S	N	E	I	T	A	L	M	L	L	A	S	D	A	F	M	Q	A	N	Y	A	Q	A	I	E	L	W	Q	K	V	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	L	A	V	P	L	L	I	K	V	A	E	A	N	P	I	N	F	N	V	R	F	R	L	G	V	A	L	D	N	L	G	R	F	D	E	A	I	D	S	F	K	I	A	L	G	L	R	P	N	E	G	K	V	H	R	A	I	A	F	S	Y	E	Q	M	G	R	H	E	E	A	L	P	H	F	K	K	A	N
Template Known Secondary structure																	T	T															T	T																	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	N	S	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	D	E	G	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions