Job Description P32712 Confidence 71.73% Date Thu Jan 5 11:50:34 GMT 2012 Rank 122 Aligned Residues 68 % Identity 18% Template c2dl1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:spartin; PDBTitle: solution structure of the mit domain from human spartin Resolution UNK

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.																.
Query SS confidence																																																									.	.	.	.	.	.	.	.																.
Query Sequence		Q	H	M	T	A	Q	T	R	A	M	I	D	K	A	L	A	L	D	S	N	E	I	T	A	L	M	L	L	A	S	D	A	F	M	Q	A	N	Y	A	Q	A	I	E	L	W	Q	K	V	M	D	L	N	S	P	R	.	.	.	.	.	.	.	.	V	N	R	T	Q	L	V	E	S	I	N	M	A	K	L	.	L
Query Conservation																																																									.	.	.	.	.	.	.	.																.
Alig confidence																					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		R	E	A	Y	K	K	A	F	L	F	V	N	K	G	L	N	T	D	E	.	.	.	.	.	.	.	.	L	G	Q	K	E	E	A	K	N	Y	Y	K	Q	G	I	G	H	L	L	R	G	I	S	I	S	S	K	E	S	E	H	T	G	P	G	W	E	S	A	R	Q	M	Q	Q	K	M	K	E	T	L	Q	N	V
Template Known Secondary structure																					.	.	.	.	.	.	.	.		T																					S	S					T	T				S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		194	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	R	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	R	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions