Job Description P32712 Confidence 99.65% Date Thu Jan 5 11:50:34 GMT 2012 Rank 39 Aligned Residues 134 % Identity 13% Template c2c2lD_ PDB info PDB header:chaperone Chain: D: PDB Molecule:carboxy terminus of hsp70-interacting protein; PDBTitle: crystal structure of the chip u-box e3 ubiquitin ligase Resolution 3.3 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	E	Y	Q	R	Q	R	D	P	L	H	Q	F	A	S	Q	Q	T	P	E	A	Q	L	Q	A	L	Q	D	K	I	R	A	N	P	Q	N	S	E	Q	W	A	L	L	G	E	Y	Y	L	W	Q	N	D	Y	S	N	S	L	L	A	Y	R	Q	A	L	Q	L	R	G	E	N	A	E	L	Y	A	A	L	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	S	A	Q	E	L	K	E	Q	G	N	R	L	F	V	G	R	K	Y	P	E	A	A	A	C	Y	G	R	A	I	T	R	N	P	L	V	A	V	Y	Y	T	N	R	A	L	C	Y	L	K	M	Q	Q	P	E	Q	A	L	A	D	C	R	R	A	L	E	L	D	G	Q	S	V	K	A	H	F	F	L	G	Q
Template Known Secondary structure									T									T	T																	T	T													T	T	T																		S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	Y	Y	Q	A	S	Q	H	M	T	A	Q	T	R	A	M	I	D	K	A	L	A	L	D	S	N	E	I	T	A	L	M	L	L	A	S	D	A	F	M	Q	A	N	Y	A	Q	A	I	E	L	W	Q	K	V	M	D
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		C	Q	L	.	.	.	E	M	E	S	Y	D	E	A	I	A	N	L	Q	R	A	Y	S	L	A	K	E	Q	R	L	N	F	G	D	D	I	P	S	A	L	R	I	A	K	K	K	R	W	N	S	I	E	E	R	R	I	H
Template Known Secondary structure			T	T	.	.	.	T	T	T																			T	T				T	T	T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		104	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions