Job Description P32712 Confidence 98.85% Date Thu Jan 5 11:50:34 GMT 2012 Rank 96 Aligned Residues 169 % Identity 11% Template c1xi4D_ PDB info PDB header:endocytosis/exocytosis Chain: D: PDB Molecule:clathrin heavy chain; PDBTitle: clathrin d6 coat Resolution 7.90 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																										70	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	L	S	P	K	W	Q	A	V	R	A	E	Y	Q	R	Q	.	.	.	R	D	P	L	H	Q	F	A	S	Q	Q	T	P	E	A	Q	L	Q	A	L	Q	D	K	I	R	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	N	S	E	Q	W	A
Query Conservation																			.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	Y	D	E	K	M	Y	D	A	A	K	L	L	Y	N	N	V	S	N	F	G	R	L	A	S	T	L	V	H	L	G	E	Y	Q	A	A	V	D	G	A	R	K	A	N	S	T	R	T	W	K	E	V	C	F	A	C	V	D	G	K	E	F	R	L	A	Q	M	C	G	L	H	I	V	V	H	A	D	E	L	E
Template Known Secondary structure						T											T	T	T												T	T												T	T	S	S		T											T	T								T		S
Template Predicted Secondary structure
Template SS confidence
		1205	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		L	L	G	E	Y	Y	L	W	Q	N	D	Y	S	N	S	L	L	A	Y	R	Q	A	L	Q	L	R	G	E	N	A	E	L	Y	A	A	L	A	T	V	L	Y	Y	Q	A	S	Q	H	M	T	A	Q	T	R	A	M	I	D	K	A	L	A	L	D	S	N	E	I	T	A	.	.	.	.	.	L	M	L	L	A	S
Query Conservation																																																																							.	.	.	.	.
Alig confidence																																													.																										.	.	.	.	.
Template Conservation																																													.
Template Sequence		E	L	I	N	Y	Y	Q	D	R	G	Y	F	E	E	L	I	T	M	L	E	A	A	L	G	L	E	R	A	H	M	G	M	F	T	E	L	A	I	L	Y	S	K	F	.	K	P	Q	K	M	R	E	H	L	E	L	F	W	S	R	V	N	I	P	K	V	L	R	A	A	E	Q	A	H	L	W	A	E	L	V	F
Template Known Secondary structure			S	S	S					T	T										T	T	T	T	T	S	S	S																	.		G	G	G					T	T	S	S	G	G	G	S		S											T
Template Predicted Secondary structure																																													.
Template SS confidence
		1285	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.		.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	M	Q	A	N	Y	A	Q	A	I	E	L	W	Q	K	V	M	D	L	N	S	P	R	V	N	R	T	Q	L	V	E	S	I	N	M	A	K	L	L	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	D	K	Y	E	E	Y	D	N	A	I	I	T	M	M	N	H	P	T	D	A	W	K	E	G	Q	F	K	D	I	I	T	K	V	A	N	V	E	L	Y	Y	R
Template Known Secondary structure						T	T												S							T	T										S	S	T
Template Predicted Secondary structure
Template SS confidence
		1364	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions