Job Description P33221 Confidence 97.65% Date Wed Jan 25 15:20:50 GMT 2012 Rank 99 Aligned Residues 123 % Identity 21% Template c3tinA_ PDB info PDB header:ligase Chain: A: PDB Molecule:ttl protein; PDBTitle: tubulin tyrosine ligase Resolution 2.90 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.			.
Query SS confidence																																																		.	.	.	.	.	.	.	.			.
Query Sequence		C	I	V	K	P	V	M	S	S	S	G	K	G	Q	T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	A	G	A	G	R	V	I	V	E	G	V	V	K	.	.	.	.	.	.	.	.	F	D	.	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P	V	G
Query Conservation																																																		.	.	.	.	.	.	.	.			.
Alig confidence							.	.	.	.															.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.			.
Template Conservation							.	.	.	.															.	.	.	.	.	.	.
Template Sequence		W	I	A	K	S	.	.	.	.	S	S	G	G	I	L	I	S	S	D	A	T	E	L	.	.	.	.	.	.	.	L	D	F	I	D	N	Q	G	Q	V	H	V	I	Q	K	Y	L	E	S	P	L	L	L	E	P	G	H	R	K	F	D	I	R	S	W	V	L	V	D	N	Q	Y	N	I	Y	L	Y	R	E	G
Template Known Secondary structure							.	.	.	.	S								S		T				.	.	.	.	.	.	.		T	T	S	T	T	T	T	S									S	S	B			B	T	T	T	T	B												T	T							S
Template Predicted Secondary structure							.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.												.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.												.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		H	R	Q	E	D	G	D	Y	R	E	S	W	.	.	.	.	.	.	.	.	.	.	.	Q	P	Q	Q	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	.	.	.	.	.	.	.	.	.	.	.	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	.	V	I	F	S	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		V	L	R	T	S	S	E	G	N	E	M	F	F	E	E	F	N	Q	Y	L	V	T	S	L	N	I	N	L	E	N	S	I	L	C	Q	I	K	E	I	I	R	V	C	L	S	C	L	E	P	A	I	S	T	K	Y	L	P	Y	H	S	F	Q	L	F	G	F	D	F	M	V	D	K	N	L	K	V	W	L	I	E
Template Known Secondary structure																					T	T	S	S	S	S	S		T	T	T	T															T	T							S	S	S	S	S													B	T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	P	R	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	G	A	P	A
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions