Job Description P33221 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 10 Aligned Residues 379 % Identity 16% Template c3ouzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:biotin carboxylase; PDBTitle: crystal structure of biotin carboxylase-adp complex from campylobacter2 jejuni Resolution 1.90 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																															.	.																			.	.	.	.	.	.	.
Query SS confidence																															.	.																			.	.	.	.	.	.	.
Query Sequence		T	R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	L	G	V	E	V	I	A	V	.	.	D	R	Y	A	D	A	P	A	M	H	V	A	H	R	S	H	V	I	.	.	.	.	.	.	.	N	M	L	D	G	D	A	L	R	R	V	V	E	L	E	K	P	H	Y	I	V	P	E	I
Query Conservation																															.	.																			.	.	.	.	.	.	.
Alig confidence																															.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	I	L	I	A	N	R	G	E	I	A	L	R	A	L	R	T	I	K	E	X	G	K	K	A	I	C	V	Y	S	E	A	D	K	D	A	L	Y	L	K	Y	A	D	A	S	I	C	I	G	K	A	R	S	S	E	S	Y	L	N	I	P	A	I	I	A	A	A	E	I	A	E	A	D	A	I	F	P	G	Y
Template Known Secondary structure																							T	T									G	G	G	T	T		T					S	S									T	T	T	T	G	G	G													T		S						S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																	.																																	.	.
Query SS confidence				.	.																	.																																	.	.
Query Sequence		E	A	.	.	I	A	T	D	M	L	I	Q	L	E	E	E	G	L	N	V	.	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	Y	R	.	.	F	A	D	S	E	S	L	F	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M
Query Conservation				.	.																	.																																	.	.
Alig confidence				.	.																	.																			.														.	.
Template Conservation																																									.
Template Sequence		G	F	L	S	E	N	Q	N	F	V	E	I	C	A	K	H	N	I	K	F	I	G	P	S	V	E	A	X	N	L	X	S	D	K	S	K	A	K	Q	.	V	X	Q	R	A	G	V	P	V	I	P	G	S	D	G	A	L	A	G	A	E	A	A	K	K	L	A	K	E	I	G	Y	P	V	I	L	K	A	A	A
Template Known Secondary structure		S	T	T	T	T											T	T				S	S											S							.					T	T			B		S	B		S	S	S			S													S	S						T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																													.	.																																								.	.
Query SS confidence																													.	.																																								.	.
Query Sequence		S	S	S	G	K	G	Q	T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	.	.	R	A	G	A	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P	V	G	H	R	.	.	Q	E	D	G	D	Y	R	E	S	W
Query Conservation																													.	.																																								.	.
Alig confidence																													.	.																																								.	.
Template Conservation
Template Sequence		G	G	G	G	R	G	X	R	V	V	E	N	E	K	D	L	E	K	A	Y	W	S	A	E	S	E	A	X	T	A	F	G	D	G	T	X	Y	X	E	K	Y	I	Q	N	P	R	H	I	E	V	Q	V	I	G	D	S	F	G	N	V	I	H	V	G	E	R	D	C	S	X	Q	R	R	H	Q	K	L	I	E	E
Template Known Secondary structure				T	T		S						S	G	G	G																	S											S	S												T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		235	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure						.																																					.
Query SS confidence						.																																					.
Query Sequence		Q	P	Q	Q	.	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	.	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	V	T	L	I	S	Q	D	L	S	E	F	A	L	H	V	R	A	F	L	G	L	P	V
Query Conservation						.																																					.
Alig confidence						.																																					.
Template Conservation
Template Sequence		S	P	A	I	L	L	D	E	K	T	R	T	R	L	H	E	T	A	I	K	A	A	K	A	I	G	Y	E	G	A	G	T	F	E	F	L	V	D	K	N	L	D	F	Y	F	I	E	X	N	T	R	L	Q	V	E	H	C	V	S	E	X	V	S	G	I	D	I	I	E	Q	X	I	K	V	A	E	G	Y	A	L
Template Known Secondary structure			S		T	T	S																			T	T													T	T										S	S			T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		313	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.							.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure										.	.	.																													.	.	.	.	.	.													.	.
Query SS confidence										.	.	.																													.	.	.	.	.	.													.	.
Query Sequence		G	G	I	R	Q	Y	G	P	.	.	.	A	A	S	A	V	I	L	P	Q	L	T	S	Q	N	V	T	F	D	N	V	Q	N	A	V	G	A	D	L	.	.	.	.	.	.	Q	I	R	L	F	G	K	P	E	I	D	G	.	.	S	R	R	L	G	V	A	L	A	T	A	E	S	V	V	D	A	I	E	R	A
Query Conservation										.	.	.																													.	.	.	.	.	.													.	.
Alig confidence										.	.	.																													.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		P	S	Q	E	S	I	K	L	N	G	H	S	I	E	C	R	I	T	A	E	D	S	K	T	F	L	P	S	P	G	K	I	T	K	Y	I	P	P	A	G	R	N	V	R	X	E	S	H	C	Y	Q	D	Y	S	V	P	A	Y	Y	D	S	X	I	G	K	L	V	V	W	A	E	D	R	N	K	A	I	A	K	X
Template Known Secondary structure				G	G	G					S									S	B		T	T	T			B						S							S	T	T									T	T					T	T	T												S	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		382	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	A	A	G	Q	V	K	V	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	A	L	D	E	L	L	I	S	G
Template Known Secondary structure												S
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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