 |
Job Description | P33221 | Confidence | 97.16% | Date | Wed Jan 25 15:20:50 GMT 2012 |
Rank | 140 | Aligned Residues | 83 |
% Identity | 14% | Template | c3i5mA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:putative leucoanthocyanidin reductase 1; |
PDBTitle: structure of the apo form of leucoanthocyanidin reductase from vitis2 vinifera
|
Resolution | 2.72 Å |
|
 |
  |   |
14 | . | . | . | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | M | L | L | G | S | . |
G | E | L | G | K | E | V | A | I | E | C | Q | R | L | G | V | E | V | I | A | V | D | R | Y | A | D | A | P | A | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
H | V | A | H | R | S | H | V | I | N | M | L | D | G | D | A | L | R | R | V | V | E | L | E | K | P | H | Y | I | V | P | E | I |
Query Conservation |   |
  |
|
|
|
|
|   | . |
|   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
R | V | L | I | A | G | A | T | G | F | I | G | Q | F | V | A | T | A | S | L | D | A | H | R | P | T | Y | I | L | A | R | P | G | P | R | S | P | S | K | A | K | I | F | K | A | L | E | D | K | G | A | I | I | V | Y | G | L | I | N | E | Q | E | A | M | E | K | I | L | K | E | H | E | I | D | I | V | V | S | T | V |
Template Known Secondary structure |   |
|  |  |  |  |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | I | A | T | D | M | L | I | Q | L | E | E |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | G | E | S | I | L | D | Q | I | A | L | V | K |
Template Known Secondary structure |   |
| T | T | S | G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|