Job Description P33221 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 21 Aligned Residues 374 % Identity 17% Template c3gidB_ PDB info PDB header:ligase Chain: B: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: the biotin carboxylase (bc) domain of human acetyl-coa2 carboxylase 2 (acc2) in complex with soraphen a Resolution 2.30 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.										.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.								.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.								.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		T	R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	L	.	.	.	.	.	.	.	.	.	G	V	E	V	I	A	V	.	.	.	.	D	R	Y	A	D	A	P	A	M	H	V	A	H	R	S	H	V	I	N	.	.	.	.	.	.	.	M	L	D	G	D	A	L	R	R	V	V	E
Query Conservation																								.	.	.	.	.	.	.	.	.								.	.	.	.																				.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.								.	.	.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	V	L	I	A	N	N	G	I	A	A	V	K	C	M	R	S	I	R	R	W	A	Y	E	M	F	R	N	E	R	A	I	R	F	V	V	M	V	T	P	E	D	L	K	A	N	A	E	Y	I	K	M	A	D	H	Y	V	P	V	P	G	G	P	N	N	N	N	Y	A	N	V	E	L	I	V	D	I	A	K
Template Known Secondary structure																													S		T	T	S	S														T							S	S								S	S	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		73	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.										.	.	.	.	.	.	.	.	140
Predicted Secondary structure														.	.																		.																															.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																		.																															.	.	.	.	.	.	.	.	.
Query Sequence		L	E	K	P	H	Y	I	V	P	E	I	E	.	.	A	I	A	T	D	M	L	I	Q	L	E	E	E	G	L	N	V	.	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	.	.	.	.	.	.	.	.	.	Y	R	F	A	D	S	E	S	L
Query Conservation														.	.																		.																															.	.	.	.	.	.	.	.	.
Alig confidence														.	.																		.																			.												.	.	.	.	.	.	.	.	.
Template Conservation																																																				.
Template Sequence		R	I	P	V	Q	A	V	W	A	G	W	G	H	A	S	E	N	P	K	L	P	E	L	L	C	K	N	G	V	A	F	L	G	P	P	S	E	A	M	W	A	L	G	D	K	I	A	S	T	V	.	V	A	Q	T	L	Q	V	P	T	L	P	W	S	G	S	G	L	T	V	E	K	G	C	V	K	D	V	D	E
Template Known Secondary structure			T	T		S						S	S	T	T	T	T		T									T	T				S	S									T	T	S							.					T	T			B			B	T	T	T	T								B		S
Template Predicted Secondary structure																																																				.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M	S	S	S	G	K	G	Q	T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	A	G	A	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P
Query Conservation
Alig confidence																		.	.	.																														.	.
Template Conservation																		.	.	.																														.	.
Template Sequence		G	L	E	A	A	E	R	I	G	F	P	L	M	I	K	A	.	.	.	S	E	G	K	G	I	R	K	A	E	S	A	E	D	F	P	I	L	F	R	Q	V	Q	S	E	I	P	G	S	.	.	P	I	F	L	M	K	L	A	Q	H	A	R	H	L	E	V	Q	I	L	A	D	Q	Y	G	N	A	V	S	L	F
Template Known Secondary structure											S	S						.	.	.											S	T	T	T												S	T	T		.	.									S	S												S	S	S
Template Predicted Secondary structure																		.	.	.																														.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.			.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		V	G	H	R	Q	E	D	G	D	Y	R	E	S	W	Q	P	Q	Q	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	.	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	V	T	L	I	S	Q	D	L	S	E
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		G	R	D	C	S	I	Q	Q	K	I	V	E	E	A	P	A	T	I	A	P	L	A	I	F	E	F	M	E	Q	C	A	I	R	L	A	K	T	V	G	Y	V	S	A	G	T	V	E	Y	L	Y	S	Q	D	G	S	F	H	F	L	E	L	N	P	R	L	Q	V	E	H	P	C	T	E	M	I	A	D	V	N	L
Template Known Secondary structure																S			S	S																			T	T													S	S	S										S			T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.																												.	.																		.	.	.	.
Query SS confidence																					.	.	.	.	.	.																												.	.																		.	.	.	.
Query Sequence		F	A	L	H	V	R	A	F	L	G	L	P	V	G	G	I	R	Q	Y	.	.	.	.	.	.	G	P	A	A	S	A	V	I	L	P	Q	L	T	S	Q	N	V	T	F	D	N	V	Q	N	A	V	G	.	.	A	D	L	Q	I	R	L	F	G	K	P	E	I	D	G	S	R	.	.	.	.	R	L	G	V	A
Query Conservation																					.	.	.	.	.	.																												.	.																		.	.	.	.
Alig confidence																					.	.	.	.	.	.																												.	.																		.	.	.	.
Template Conservation
Template Sequence		P	A	A	Q	L	Q	I	A	M	G	V	P	L	H	R	L	K	D	I	R	L	L	Y	G	E	S	P	W	G	V	T	P	I	S	F	E	T	P	S	N	P	P	L	A	R	G	H	V	I	A	A	R	I	T	S	G	T	V	Q	E	L	N	F	R	S	S	K	N	V	W	G	Y	F	S	V	Q	F	G	H	C
Template Known Secondary structure										T	T			G	G	G								T	T	S		T	T								S	S		S	S						S																		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	A	E	S	V	V	D	A	I	E	R	A	K	H	A	A	G	Q	V	K	V	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	W	G	E	N	R	E	E	A	I	S	N	M	V	V	A	L	K	E	L	S	I	R	R
Template Known Secondary structure						S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions