Job Description P33221 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 6 Aligned Residues 379 % Identity 19% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																				.	.														.	.	.	.	.	.	.	.
Query SS confidence																																				.	.														.	.	.	.	.	.	.	.
Query Sequence		T	R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	L	G	V	E	V	I	A	V	D	R	Y	A	D	.	.	A	P	A	M	H	V	A	H	R	S	H	V	I	.	.	.	.	.	.	.	.	N	M	L	D	G	D	A	L	R	R	V	V	E	L	E	K	P	H	Y	I	V	P	E
Query Conservation																																				.	.														.	.	.	.	.	.	.	.
Alig confidence																																				.	.														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	L	L	V	A	N	R	G	E	I	A	I	R	I	F	R	A	A	A	E	L	D	I	S	T	V	A	I	Y	S	N	E	D	K	S	S	L	H	R	Y	K	A	D	E	S	Y	L	V	G	S	D	L	G	P	A	E	S	Y	L	N	I	E	R	I	I	D	V	A	K	Q	A	N	V	D	A	I	H	P	G
Template Known Secondary structure							S																T	T									S	T	T	T	T		G	G	G	G	S	S	S							S	S			S	S	S	T	T	T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		83	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																	.																															.	.
Query SS confidence					.	.																	.																															.	.
Query Sequence		I	E	A	.	.	I	A	T	D	M	L	I	Q	L	E	E	E	G	L	N	V	.	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	.	.	Y	R	F	A	D	S	E	S	L	F	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V
Query Conservation					.	.																	.																															.	.
Alig confidence					.	.																	.																			.												.	.
Template Conservation																																										.
Template Sequence		Y	G	F	L	S	E	N	E	Q	F	A	R	R	C	A	E	E	G	I	K	F	I	G	P	H	L	E	H	L	D	M	F	G	D	K	V	K	A	R	T	.	T	A	I	K	A	D	L	P	V	I	P	G	T	D	G	P	I	K	S	Y	E	L	A	K	E	F	A	E	E	A	G	F	P	L	M	I	K	A	T
Template Known Secondary structure		S	S	S	S	T	T											T	T				S	S	S									S	S							.					T	T			B					S	S				T	T									S	S		S							S
Template Predicted Secondary structure																																										.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																															.	.																																						.	.
Query SS confidence																															.	.																																						.	.
Query Sequence		M	S	S	S	G	K	G	Q	T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	.	.	A	G	A	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P	V	G	H	.	.	R	Q	E	D	G	D	Y	R	E	S
Query Conservation																															.	.																																						.	.
Alig confidence																															.	.																																						.	.
Template Conservation
Template Sequence		S	G	G	G	G	K	G	M	R	I	V	R	E	E	S	E	L	E	D	A	F	H	R	A	K	S	E	A	E	K	S	F	G	N	S	E	V	Y	I	E	R	Y	I	D	N	P	K	H	I	E	V	Q	V	I	G	D	E	H	G	N	I	V	H	L	F	E	R	D	C	S	V	Q	R	R	H	Q	K	V	V	E
Template Known Secondary structure		S				G	G	G						S	T	T	T																S	S											S	S												T	T	S														S	S	S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		234	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		W	Q	P	Q	.	Q	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	V	T	L	I	S	Q	D	L	S	E	F	A	L	H	V	R	A	F	L	G	L	P	V
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		V	A	P	S	V	G	L	S	P	T	L	R	Q	R	I	C	D	A	A	I	Q	L	M	E	N	I	K	Y	V	N	A	G	T	V	E	F	L	V	S	G	D	E	F	F	F	I	E	V	N	P	R	V	Q	V	E	H	T	I	T	E	M	V	T	G	I	D	I	V	K	T	Q	I	L	V	A	A	G	A	D	L
Template Known Secondary structure				S		S	S																				T	T													T	T										S			T	T																						T			T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		313	.											.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.				.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																		.	.	.									.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																		.	.	.									.	.
Query Sequence		G	G	.	.	.	.	.	.	.	.	.	.	I	R	Q	Y	G	P	A	A	S	A	V	I	L	P	Q	L	T	S	Q	N	V	.	.	.	.	.	T	F	D	N	V	Q	N	A	V	G	A	D	L	Q	I	R	L	.	.	.	F	G	K	P	E	I	D	G	.	.	S	R	R	L	G	V	A	L	A	T	A	E
Query Conservation				.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																		.	.	.									.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																		.	.	.									.	.
Template Conservation
Template Sequence		F	G	E	E	I	N	M	P	Q	Q	K	D	I	T	T	L	G	Y	A	I	Q	C	R	I	T	T	E	D	P	L	N	D	F	M	P	D	T	G	T	I	I	A	Y	R	S	S	G	G	F	G	V	R	L	D	A	G	D	G	F	Q	G	A	E	I	S	P	Y	Y	D	S	L	L	V	K	L	S	T	H	A	I
Template Known Secondary structure		T	S	T	T	T					G	G	G					S									S			T	T	T	T	S								S								T	T						S	S		S	T	T					T	T	S												S
Template Predicted Secondary structure
Template SS confidence

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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