Job Description P33221 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 28 Aligned Residues 306 % Identity 28% Template c2z04A_ PDB info PDB header:lyase Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase PDBTitle: crystal structure of phosphoribosylaminoimidazole2 carboxylase atpase subunit from aquifex aeolicus Resolution 2.35 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	L	G	V	E	V	I	A	V	D	R	Y	A	D	A	P	A	M	H	V	A	H	R	S	H	V	I	N	M	L	D	G	D	A	L	R	R	V	V	E	L	E	K	P	H	Y	I	V	P	E	I	E	A	I	A	T	D	M	L	I	Q
Query Conservation
Alig confidence																																														.	.	.	.	.												.	.
Template Conservation																																														.	.	.	.	.												.	.
Template Sequence		T	V	G	I	L	G	G	G	Q	L	G	W	X	T	I	L	E	G	R	K	L	G	F	K	F	H	V	L	E	D	K	E	N	A	P	A	C	R	V	A	D	R	C	F	.	.	.	.	.	R	T	G	Q	I	S	E	F	V	D	S	.	.	C	D	I	I	T	Y	E	F	E	H	I	K	D	E	V	L	E	K
Template Known Secondary structure									S											G	G	G	T								S	S	S	S							S	S				.	.	.	.	.		G	G	G								.	.		S					S	S	S
Template Predicted Secondary structure																																														.	.	.	.	.												.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	E	G	L	N	V	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	Y	R	F	A	D	S	E	S	L	F	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M	S	S	S	G	K	G	Q	T	F	I	R	S	A	E	Q
Query Conservation
Alig confidence							.	.	.																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	E	S	K	L	.	.	.	I	P	N	P	Q	A	L	Y	V	K	K	S	R	I	R	E	K	L	.	F	L	K	K	H	G	F	P	V	P	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	I	P	V	V	I	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T	B	.	.	.	S	S		T							T								.				T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110																.	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	A	G	A	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P	V	G	H	R	Q	E	D	G	D	Y	R	E	S	W	Q	P	Q	Q	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	I	I	E	E	F	V	K	F	E	A	E	I	S	C	I	G	V	R	D	R	E	G	K	T	Y	F	Y	P	Q	P	F	N	K	H	E	.	.	.	E	G	I	L	I	Y	N	Y	V	P	Y	A	K	L	K	E	A	E	E	I	T	K	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S											T	T															.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template SS confidence
																			134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	V	L	A	L	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	.	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	V	T	L	I	S	Q	D	L	S	E	F	A	L	H	V	R	A	F	L	G	L	P	V	G	G	I	R	Q	Y	G	P	A	A	S	A	V	I	L	P	Q	L	T	S
Query Conservation																							.
Alig confidence																							.																																																						.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		L	X	E	L	L	D	I	V	G	V	F	T	V	E	F	F	L	L	K	D	G	R	V	L	I	N	E	F	A	P	R	V	H	N	T	G	H	W	T	L	D	G	A	Y	T	S	Q	F	E	N	L	L	R	A	I	T	E	X	P	L	G	S	T	E	L	K	L	P	S	G	X	V	N	I	L	.	.	.	.	G
Template Known Secondary structure						T	T													T	T	S									S	S			G	G	G	T	T					B	S	S											T	T								B	S	S									.	.	.	.	S
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.					.
		333	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		Q	N	V	T	F	D	N	V	Q	N	A	V	G	.	A	D	L	Q	I	R	L	F	G	K	P	E	I	D	G	S	R	R	L	G	V	A	L	A	T	A	E	S	V	V	D	A	I	E	R	A	K	H	A	A	G	Q
Query Conservation															.
Alig confidence															.											.
Template Conservation																										.
Template Sequence		K	S	Y	E	E	I	P	L	K	E	I	L	S	V	E	G	A	K	L	Y	W	Y	G	K	.	E	K	K	P	R	R	K	V	G	H	V	N	V	V	G	R	S	K	E	E	V	V	E	K	V	E	R	V	F	T	L
Template Known Secondary structure				G	G	G	S						T	T	S	T	T									.				T	T											S	S
Template Predicted Secondary structure																										.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions