Job Description P33221 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 24 Aligned Residues 373 % Identity 17% Template c2qk4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:trifunctional purine biosynthetic protein adenosine-3; PDBTitle: human glycinamide ribonucleotide synthetase Resolution 2.45 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		P	A	A	T	R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	.	.	L	G	V	E	V	I	A	V	D	R	Y	A	D	A	P	A	M	H	V	A	H	R	S	H	V	I	N	M	L	D	G	D	A	L	R	R	V	V	E	L	E	K	P	H	Y	I	V	P	E	I	E	A	I	A
Query Conservation																										.	.
Alig confidence																										.	.													.
Template Conservation																																								.
Template Sequence		S	M	A	A	R	V	L	I	I	G	S	G	G	R	E	H	T	L	A	W	K	L	A	Q	S	H	H	V	K	Q	V	L	V	A	P	G	N	A	.	G	T	A	C	S	E	K	I	S	N	T	A	I	S	I	S	D	H	T	A	L	A	Q	F	C	K	E	K	K	I	E	F	V	V	V	G	P	E	A	P	L
Template Known Secondary structure				S									S											T	T		T	T											G	.	G	G	S	B	S	S	S								S	S													T								S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		88	.		90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure				.													.
Query SS confidence				.													.
Query Sequence		T	D	.	M	L	I	Q	L	E	E	E	G	L	N	V	.	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	Y	R	F	A	D	S	E	S	L	F	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M	S	S	S	G	K	G	Q
Query Conservation				.													.
Alig confidence				.													.																			.																																							.	.
Template Conservation																																				.																																							.	.
Template Sequence		A	A	G	I	V	G	N	L	R	S	A	G	V	Q	C	F	G	P	T	A	E	A	A	Q	L	E	S	S	K	R	F	A	K	E	.	F	M	D	R	H	G	I	P	T	A	Q	W	K	A	F	T	K	P	E	E	A	C	S	F	I	L	S	A	D	F	P	A	L	V	V	K	A	S	.	.	G	L	K	G	V
Template Known Secondary structure			T	T								T	T					S			T	T	T	T					B							.					T	T			B							S	S												S	S								S	.	.	B
Template Predicted Secondary structure																																				.																																							.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	A	G	A	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P	V	G	H	R	Q	E	D	G	D	Y	R	E	S	W	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.											.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.											.
Template Sequence		I	V	A	K	S	K	E	E	A	C	K	A	V	Q	E	I	M	Q	E	E	T	.	.	.	.	.	I	V	I	E	E	L	L	D	G	E	.	E	V	S	C	L	C	F	T	D	G	K	T	V	A	P	M	P	P	A	Q	D	H	K	R	L	L	E	G	D	G	G	P	N	T	G	G	M	G	A	Y	C	P	A
Template Known Secondary structure					S	S												T	T				.	.	.	.	.									S		.										S	S								B								T	T	T													S
Template Predicted Secondary structure																							.	.	.	.	.											.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
				235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																											.	.																														.
Query SS confidence		.	.																											.	.																														.
Query Sequence		.	.	Q	P	Q	Q	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	G	G	.	.	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	.	V	T	L	I	S	Q	D	L	S	E	F	A	L	H	V	R	A	F	L	G
Query Conservation		.	.																											.	.																														.
Alig confidence		.	.																											.	.																														.
Template Conservation
Template Sequence		P	Q	V	S	N	D	L	L	L	K	I	K	D	T	V	L	Q	R	T	V	D	G	M	Q	Q	E	G	T	P	Y	T	G	I	L	Y	A	G	I	M	L	T	K	N	G	P	K	V	L	E	F	N	C	R	F	G	D	P	E	C	Q	V	I	L	P	L	L	K	S	D	L	Y	E	V	I	Q	S	T	L	D	G
Template Known Secondary structure		T	T													T											T	T															T	T									S	S			T	T	T					G	G	G	B		S											T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		310	.				.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350						.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																			.	.	.	.																						.	.	.	.	.
Query SS confidence				.	.	.																			.	.	.	.																						.	.	.	.	.
Query Sequence		L	P	.	.	.	V	G	G	I	R	Q	Y	G	P	A	A	S	A	V	I	L	P	Q	.	.	.	.	L	T	S	Q	N	V	T	F	D	N	V	Q	N	A	V	G	A	D	L	Q	I	.	.	.	.	.	R	L	F	G	K	P	E	I	D	G	S	R	R	L	G	V	A	L	A	T	A	E	S	V	V	D	A
Query Conservation				.	.	.																			.	.	.	.																						.	.	.	.	.
Alig confidence				.	.	.																			.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		L	L	C	T	S	L	P	V	W	L	E	N	H	T	A	L	T	V	V	M	A	S	K	G	Y	P	G	D	Y	T	K	G	V	E	I	T	G	F	P	E	A	Q	A	L	G	L	E	V	F	H	A	G	T	A	L	K	N	G	K	V	V	T	H	G	G	R	V	L	A	V	T	A	I	R	E	N	L	I	S	A
Template Known Secondary structure			G	G	G	G				B		T	T											T	T	T	T	S	S				S		B		B								T	T						S	S					T	T						S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R	A	K	H	A	A	G	Q	V	K	V	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	A	K	K	G	L	A	A	I	K	F	E	G
Template Known Secondary structure													B		T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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