Job Description P33221 Confidence 99.86% Date Wed Jan 25 15:20:50 GMT 2012 Rank 65 Aligned Residues 228 % Identity 14% Template c2p0aA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:synapsin-3; PDBTitle: the crystal structure of human synapsin iii (syn3) in complex with2 amppnp Resolution 1.90 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																																																			.	.	.	.
Query SS confidence																.	.	.	.	.	.	.																																																			.	.	.	.
Query Sequence		K	P	H	Y	I	V	P	E	I	E	A	I	A	T	.	.	.	.	.	.	.	D	M	L	I	Q	L	E	E	E	G	L	N	V	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	Y	R	F	A	D	S	E	.	.	.	.	S	L	F	R	E
Query Conservation																.	.	.	.	.	.	.																																																			.	.	.	.
Alig confidence																.	.	.	.	.	.	.																																	.																		.	.	.	.
Template Conservation																																																							.
Template Sequence		K	P	D	F	I	L	V	R	Q	H	A	Y	S	M	A	L	G	E	D	Y	R	S	L	V	I	G	L	Q	Y	G	G	L	P	A	V	N	S	L	Y	S	V	Y	N	F	C	S	K	P	W	V	F	S	Q	.	L	I	K	I	F	H	S	L	G	P	E	K	F	P	L	V	E	Q	T	F	F	P	N	H	K	P
Template Known Secondary structure				S						S		S			G	G	G	T													T	T					S								T	T									.										T	T	T	S		B							S	S	S	T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M	S	S	S	G	K	G	Q	T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	A	G	A	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P	V	G	H
Query Conservation
Alig confidence																																													.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		M	V	T	A	P	H	F	P	V	V	V	K	L	G	H	A	H	A	G	M	G	K	I	K	V	E	N	Q	L	D	F	Q	D	I	T	S	V	V	A	M	A	K	T	.	.	.	.	Y	A	T	T	E	A	F	I	D	S	K	Y	D	I	R	I	Q	K	I	G	S	N	Y	K	A	Y	M	R	T	S	I	S	G
Template Known Secondary structure						S	S	S	S						S	S			T	T	T	T						S															T		.	.	.	.																				T	T										S	S	S
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		R	Q	E	D	G	D	Y	R	E	S	W	Q	P	Q	Q	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	.	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	V	T	L	I	S	Q	D	L	S	E	F	A	L
Query Conservation																																																					.
Alig confidence																			.	.	.	.																															.
Template Conservation																			.	.	.	.
Template Sequence		N	W	K	A	N	T	G	S	A	M	L	E	Q	V	A	M	T	.	.	.	.	E	R	Y	R	L	W	V	D	S	C	S	E	M	F	G	G	L	D	I	C	A	V	K	A	V	H	S	K	D	G	R	D	Y	I	I	E	V	M	D	S	S	M	P	L	I	G	E	H	V	E	E	D	R	Q	L	M	A	D	L
Template Known Secondary structure			S	S	T	T	S	S	S										.	.	.	.											T	T	G	G	G			S										T	T	S										T	T					G	G	G
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	R	A	F	L	G	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	S	K	M	S	Q	L	P
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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