Job Description P33221 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 2 Aligned Residues 375 % Identity 49% Template c2dwcB_ PDB info PDB header:transferase Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp Resolution 1.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	T	A	L	R	P	A	A	T	R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	L	G	V	E	V	I	A	V	D	R	Y	A	D	A	P	A	M	H	V	A	H	R	S	H	V	I	N	M	L	D	G	D	A	L	R	R	V	V	E	L	E	K	P	H	Y	I	V	P	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	T	A	T	T	D	S	A	Q	K	I	L	L	L	G	S	G	E	L	G	K	E	I	A	I	E	A	Q	R	L	G	V	E	V	V	A	V	D	R	Y	A	N	A	P	A	M	Q	V	A	H	R	S	Y	V	G	N	M	M	D	K	D	F	L	W	S	V	V	E	R	E	K	P	D	A	I	I	P	E	I
Template Known Secondary structure					T	T	S	T	T								S		S													T	T								S	S	T	T							S	S					S		T	T															S						S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	I	A	T	D	M	L	I	Q	L	E	E	E	G	L	N	V	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	Y	R	F	A	D	S	E	S	L	F	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M	S	S	S	G	K
Query Conservation
Alig confidence																																																																											.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		E	A	I	N	L	D	A	L	F	E	F	E	K	D	G	Y	F	V	V	P	N	A	R	A	T	W	I	A	M	H	R	E	R	L	R	E	T	L	V	K	E	A	K	V	P	T	S	R	Y	M	Y	A	T	T	L	D	E	L	Y	E	A	C	E	K	I	G	Y	P	C	H	T	K	A	.	.	.	.	I	M	S
Template Known Secondary structure		S		S											T	T			B	S	S									T	S											T	T											S	S													S	S						.	.	.	.	S
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		G	Q	T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	A	G	A	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	.	.	.	.	.	H	F	C	A	P	V	G	H	R	Q	E	D	G	D	Y	R	E	S	W	Q	P	Q	Q
Query Conservation																																																						.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	Y	F	V	K	G	P	E	D	I	P	K	A	W	.	.	.	.	.	.	.	.	.	E	E	E	K	I	I	V	E	E	H	I	D	F	D	V	E	V	T	E	L	A	V	R	H	F	D	E	N	G	E	I	V	T	T	F	P	K	P	V	G	H	Y	Q	I	D	G	D	Y	H	A	S	W	Q	P	A	E
Template Known Secondary structure								S	G	G	G						.	.	.	.	.	.	.	.	.	T													S													T	T	S																T	T								S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	.	.	V	T	L	I	S	Q	D	L	S	E	F	A	L	H	V	R	A	F	L	G	L	P	V	G	G	I	R
Query Conservation																																																					.	.
Alig confidence																																																					.	.
Template Conservation
Template Sequence		I	S	E	K	A	E	R	E	V	Y	R	I	A	K	R	I	T	D	V	L	G	G	L	G	I	F	G	V	E	M	F	V	K	G	D	K	V	W	A	N	E	V	S	P	R	P	H	D	T	G	M	V	T	L	A	S	H	P	P	G	F	S	E	F	A	L	H	L	R	A	V	L	G	L	P	I	P	G	E	W
Template Known Secondary structure																							S	S											T	T									S	S			G	G	G	G	G					S		T	T		S											T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		317	.									.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.																												.
Query SS confidence				.	.	.	.	.	.	.	.																												.
Query Sequence		Q	Y	.	.	.	.	.	.	.	.	G	P	A	A	S	A	V	I	L	P	Q	L	T	S	Q	N	V	T	F	D	N	V	Q	N	A	V	G	.	A	D	L	Q	I	R	L	F	G	K	P	E	I	D	G	S	R	R	L	G	V	A	L	A	T	A	E	S	V	V	D	A	I	E	R	A	K	H	A	A	G	Q
Query Conservation				.	.	.	.	.	.	.	.																												.
Alig confidence				.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		V	D	G	Y	R	L	F	P	M	L	I	P	A	A	T	H	V	I	K	A	K	V	S	G	Y	S	P	R	F	R	G	L	V	K	A	L	S	V	P	N	A	T	V	R	L	F	G	K	P	E	A	Y	V	G	R	R	L	G	I	A	L	A	W	D	K	D	V	E	V	A	K	R	K	A	E	M	V	A	H	M
Template Known Secondary structure			T	T							S	S										S	S				S										T	T	S	T	T									S				T	T											S	S														T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		388	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions