Job Description P33221 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 18 Aligned Residues 381 % Identity 14% Template c1w96B_ PDB info PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a Resolution 1.8 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.												.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.				.	.																				.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.				.	.																				.	.	.	.	.	.	.
Query Sequence		T	A	L	R	P	A	A	T	R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	L	G	V	E	V	.	.	.	.	.	.	.	.	.	.	.	I	A	V	.	.	D	R	Y	A	D	A	P	A	M	H	V	A	H	R	S	H	V	I	N	.	.	.	.	.	.	.	M	L	D	G	D
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.				.	.																				.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.				.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	G	H	T	V	I	S	K	I	L	I	A	N	N	G	I	A	A	V	K	E	I	R	S	V	R	K	W	A	Y	E	T	F	G	D	D	R	T	V	Q	F	V	A	M	A	T	P	E	D	L	E	A	N	A	E	Y	I	R	M	A	D	Q	Y	I	E	V	P	G	G	T	N	N	N	N	Y	A	N	V	D
Template Known Secondary structure		T	T		S	B																														S		T	T	S	S													T	T							S	S								S	S	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																						.	.													.	.					.																																	.	.	.	.	.	.	.
Query SS confidence																						.	.													.	.					.																																	.	.	.	.	.	.	.
Query Sequence		A	L	R	R	V	V	E	L	E	K	P	H	Y	I	V	P	E	I	E	A	.	.	I	A	T	D	M	L	I	Q	L	E	E	E	.	.	G	L	N	V	.	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	Y	R	.	.	.	.	.	.	.
Query Conservation																						.	.													.	.					.																																	.	.	.	.	.	.	.
Alig confidence																						.	.													.	.					.																			.														.	.	.	.	.	.	.
Template Conservation																																																													.
Template Sequence		L	I	V	D	I	A	E	R	A	D	V	D	A	V	W	A	G	W	G	H	A	S	E	N	P	L	L	P	E	K	L	S	Q	S	K	R	K	V	I	F	I	G	P	P	G	N	A	M	R	S	L	G	D	K	I	S	S	T	I	.	V	A	Q	S	A	K	V	P	C	I	P	W	S	G	T	G	V	D	T	V
Template Known Secondary structure										T	T		S						S	S	T	T	T	T		T									S	T	T					S	S									S		S							.					T	T			B			B	T	T	T	T
Template Predicted Secondary structure																																																													.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
																					134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	D	S	E	S	L	F	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M	S	S	S	G	K	G	Q	T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	A	G	A	G	R	V	I	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Template Conservation																																																																												.	.
Template Sequence		H	V	D	E	K	T	G	L	V	S	V	D	D	D	I	Y	Q	K	G	C	C	T	S	P	E	D	G	L	Q	K	A	K	R	I	G	F	P	V	M	I	K	A	S	E	G	G	G	G	K	G	I	R	Q	V	E	R	E	E	D	F	I	A	L	Y	H	Q	A	A	N	E	I	P	G	S	.	.	P	I	F	I
Template Known Secondary structure					T	T	T											G	G	G	S		S	S													S	S						T	T			S	S	T	T					S	S	G	G	G												S	T	T		.	.
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																.	.															.
Query SS confidence																																.	.															.
Query Sequence		E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P	V	G	H	R	.	.	Q	E	D	G	D	Y	R	E	S	W	Q	P	Q	Q	.	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	G	G	Y	G	L	F	G	V	E	L	F	V	C
Query Conservation																																.	.															.
Alig confidence																																.	.															.
Template Conservation
Template Sequence		M	K	L	A	G	R	A	R	H	L	E	V	Q	L	L	A	D	Q	Y	G	T	N	I	S	L	F	G	R	D	C	S	V	Q	R	R	H	Q	K	I	I	E	E	A	P	V	T	I	A	K	A	E	T	F	H	E	M	E	K	A	A	V	R	L	G	K	L	V	G	Y	V	S	A	G	T	V	E	Y	L	Y	S
Template Known Secondary structure							S												T	T	S															T	T								S			S	S																				T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
				272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.																														.	.	.	320
Predicted Secondary structure		.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	D	E	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	V	T	L	I	S	Q	D	L	S	E	F	A	L	H	V	R	A	F	L	G	L	P	V	G	G	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	G	P
Query Conservation		.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	D	D	G	K	F	Y	F	L	E	L	N	P	R	L	Q	V	E	H	P	T	T	E	M	V	S	G	V	N	L	P	A	A	Q	L	Q	I	A	M	G	I	P	M	H	R	I	S	D	I	R	T	L	Y	G	M	N	P	H	S	A	S	E	I	D	F	E	F	K	T	Q	D	A	T	K	K	Q	R	R	P	I
Template Known Secondary structure		T	T	T	T										S			T	T	T																				T	T			G	G	G								T	T			T	T							T	T			S
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.					360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		A	A	S	A	V	I	L	P	Q	L	T	S	Q	N	V	T	F	D	N	V	Q	N	A	V	G	A	D	L	Q	I	R	L	F	G	K	P	E	I	D	.	.	.	.	G	S	R	R	L	G	V	A	L	A	T	A	E	S	V	V	D	A	I	E	R	A	K	H	A	A	G	Q	V	K	V	Q	G
Query Conservation																																									.	.	.	.
Alig confidence																		.	.	.																					.	.	.	.
Template Conservation																		.	.	.
Template Sequence		P	K	G	H	C	T	A	C	R	I	T	G	T	L	H	E	.	.	.	L	N	F	R	S	S	S	N	V	W	G	Y	F	S	V	G	N	N	G	N	I	H	S	F	S	D	S	Q	F	G	H	I	F	A	F	G	E	N	R	Q	A	S	R	K	H	M	V	V	A	L	K	E	L	S	I	R	G
Template Known Secondary structure				S														.	.	.				S	S		S	S									T	T		S	S		S	S		S											S	S																		T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.				.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.