Job Description P33221 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 27 Aligned Residues 361 % Identity 16% Template c1vkzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution Resolution 2.30 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	L	G	V	E	V	I	A	V	D	R	Y	A	D	A	P	A	M	H	V	A	H	R	S	H	V	I	N	M	L	D	G	D	A	L	R	R	V	V	E	L	E	K	P	H	Y	I	V	P	E	I	E	A	I	A	T	D	M	L	I	Q
Query Conservation
Alig confidence																																								.	.	.	.	.	.															.	.													.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.															.	.													.	.	.	.	.	.	.	.
Template Sequence		R	V	H	I	L	G	S	G	G	R	E	H	A	I	G	W	A	F	A	K	Q	G	Y	E	V	H	F	Y	P	G	N	A	G	T	K	R	D	G	.	.	.	.	.	.	T	N	H	P	Y	E	G	E	K	T	L	K	A	I	.	.	P	E	E	D	I	V	I	P	G	S	E	E	.	.	.	.	.	.	.	.
Template Known Secondary structure									S													T	T										T	T	G	G	G	T	S	.	.	.	.	.	.							T						T	S	.	.		S	S						S	S	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.															.	.													.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		L	E	E	E	G	L	N	V	.	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	Y	R	F	A	D	S	E	S	L	F	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M	S	S	S	G	K	G	Q	T	F	I	R	S	A	E
Query Conservation										.
Alig confidence										.																			.
Template Conservation																													.
Template Sequence		F	L	V	E	R	S	N	V	F	G	P	V	K	E	V	A	R	L	E	G	S	K	V	Y	A	K	R	.	F	X	K	K	Y	G	I	R	T	A	R	F	E	V	A	E	T	P	E	E	L	R	E	K	I	K	K	F	S	P	P	Y	V	I	K	A	D	G	L	A	R	G	K	G	V	L	I	L	D	S	K	E
Template Known Secondary structure		G	T				T	T	B	S	S																		.					T	T										S	S									T	T	S		S	S						S	S			S	S							S	S
Template Predicted Secondary structure																													.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																		.	.																																							.	.	.	.	.	.	.	.
Query SS confidence																		.	.																																							.	.	.	.	.	.	.	.
Query Sequence		Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	A	G	.	.	A	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P	V	G	H	R	Q	E	.	.	.	.	.	.	.	.	D	G	D	Y	R	E	S	W	Q	P	Q	Q	M	S	P	L
Query Conservation																		.	.																																							.	.	.	.	.	.	.	.
Alig confidence																		.	.														.																									.	.	.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		E	T	I	E	K	G	S	K	L	I	I	G	E	L	I	K	G	V	K	G	P	V	V	I	D	E	F	L	A	G	N	.	E	L	S	A	X	A	V	V	N	G	R	N	F	V	I	L	P	F	V	R	D	Y	K	R	L	X	D	G	D	R	G	P	N	T	G	G	X	G	S	W	G	P	V	E	I	P	S	D
Template Known Secondary structure													T	S	S	S	T	T			S										S		.										T	T																T	T	T						S		S
Template Predicted Secondary structure																																	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																																				.
Query SS confidence																		.	.	.	.	.																																				.
Query Sequence		A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	.	.	.	.	.	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	V	T	L	I	.	S	Q	D	L	S	E	F	A	L	H	V	R	A	F	L	G	L	P	V	G	G	I	R
Query Conservation																		.	.	.	.	.																																				.
Alig confidence																		.	.	.	.	.																																				.
Template Conservation
Template Sequence		T	I	K	K	I	E	E	L	F	D	K	T	L	W	G	V	E	K	E	G	Y	A	Y	R	G	F	L	Y	L	G	L	X	L	H	D	G	D	P	Y	I	L	E	Y	N	V	R	L	G	D	P	E	T	E	V	I	V	T	L	N	P	E	G	F	V	N	A	V	L	E	G	Y	R	G	G	K	X	E	P	V	E
Template Known Secondary structure																				T	T															T	T									S	S			T	T																							T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		317	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		Q	Y	G	P	A	A	S	A	V	I	L	P	Q	.	.	.	.	L	T	S	Q	N	V	T	F	D	N	V	Q	N	A	V	G	A	D	L	Q	I	R	L	F	G	K	P	E	I	D	G	S	R	R	L	G	V	A	L	A	T	A	E	S	V	V	D	A	I	E	R	A	K	H	A	A	G	Q	V	K	V	Q	G
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		P	R	G	F	A	V	D	V	V	L	A	A	R	G	Y	P	D	A	P	E	K	G	K	E	I	T	L	P	E	E	G	L	I	F	F	A	G	V	A	E	K	D	G	K	L	V	T	N	G	G	R	V	L	H	C	X	G	T	G	E	T	K	E	E	A	R	R	K	A	Y	E	L	A	E	K	V	H	F	E	G
Template Known Secondary structure				S										T	T	T	T	T	S						B		B			S	S						S	S					T	T						S	S										S	S																B		T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions