Job Description P33221 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 11 Aligned Residues 379 % Identity 16% Template c1ulzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																															.	.																			.	.	.	.	.	.
Query SS confidence																															.	.																			.	.	.	.	.	.
Query Sequence		T	R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	L	G	V	E	V	I	A	V	.	.	D	R	Y	A	D	A	P	A	M	H	V	A	H	R	S	H	V	I	.	.	.	.	.	.	N	M	L	D	G	D	A	L	R	R	V	V	E	L	E	K	P	H	Y	I	V	P	E	I	E
Query Conservation																															.	.																			.	.	.	.	.	.
Alig confidence																															.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	V	L	V	A	N	R	G	E	I	A	V	R	I	I	R	A	C	K	E	L	G	I	P	T	V	A	I	Y	N	E	V	E	S	T	A	R	H	V	K	L	A	D	E	A	Y	M	I	G	T	D	P	L	D	T	Y	L	N	K	Q	R	I	I	N	L	A	L	E	V	G	A	D	A	I	H	P	G	Y	G
Template Known Secondary structure		S	S																					T									G	G	G	T	T							S	S							S	S	T	T																T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																	.																															.	.
Query SS confidence			.	.																	.																															.	.
Query Sequence		A	.	.	I	A	T	D	M	L	I	Q	L	E	E	E	G	L	N	V	.	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	.	.	Y	R	F	A	D	S	E	S	L	F	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M	S
Query Conservation			.	.																	.																															.	.
Alig confidence			.	.																	.																			.												.	.
Template Conservation																																								.
Template Sequence		F	L	A	E	N	A	E	F	A	K	M	C	E	E	A	G	I	T	F	I	G	P	H	W	K	V	I	E	L	M	G	D	K	A	R	S	K	E	.	V	M	K	K	A	G	V	P	V	V	P	G	S	D	G	V	L	K	S	L	E	E	A	K	A	L	A	R	E	I	G	Y	P	V	L	L	K	A	T	A	G
Template Known Secondary structure		T	T	T	T											T	T				S	S	S										S							.					T	T			B			B		S	S	S																S	S							S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																											.	.																																									.	.
Query SS confidence																											.	.																																									.	.
Query Sequence		S	S	G	K	G	Q	T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	.	.	G	R	A	G	A	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H	F	C	A	P	V	G	H	R	.	.	Q	E	D	G	D	Y	R	E	S	W	Q
Query Conservation																											.	.																																									.	.
Alig confidence																											.	.																																									.	.
Template Conservation
Template Sequence		G	G	G	R	G	I	R	I	C	R	N	E	E	E	L	V	K	N	Y	E	Q	A	S	R	E	A	E	K	A	F	G	R	G	D	L	L	L	E	K	F	I	E	N	P	K	H	I	E	Y	Q	V	L	G	D	K	H	G	N	V	I	H	L	G	E	R	D	C	S	I	Q	R	R	N	Q	K	L	V	E	I	A
Template Known Secondary structure		S	S			S					S	S																		T	T	S												S												T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		236	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure					.																																					.
Query SS confidence					.																																					.
Query Sequence		P	Q	Q	.	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	.	V	I	F	S	E	V	S	P	R	P	H	D	T	G	M	V	T	L	I	S	Q	D	L	S	E	F	A	L	H	V	R	A	F	L	G	L	P	V	G
Query Conservation					.																																					.
Alig confidence					.																																					.
Template Conservation
Template Sequence		P	S	L	I	L	T	P	E	K	R	E	Y	Y	G	N	I	V	T	K	A	A	K	E	I	G	Y	Y	N	A	G	T	M	E	F	I	A	D	Q	E	G	N	L	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	V	S	E	M	V	T	G	I	D	I	V	K	W	Q	I	K	I	A	A	G	E	P	L	T
Template Known Secondary structure		S		S	S																				T	T													T	T											S			T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		314	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.						.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure									.	.	.	.															.	.	.	.	.																													.	.	.	.
Query SS confidence									.	.	.	.															.	.	.	.	.																													.	.	.	.
Query Sequence		G	I	R	Q	Y	G	P	.	.	.	.	A	A	S	A	V	I	L	P	Q	L	T	S	Q	N	.	.	.	.	.	V	T	F	D	N	V	Q	N	A	V	G	A	D	L	Q	I	R	L	F	G	K	P	E	I	D	G	S	R	.	.	.	.	R	L	G	V	A	L	A	T	A	E	S	V	V	D	A	I	E	R
Query Conservation									.	.	.	.															.	.	.	.	.																													.	.	.	.
Alig confidence									.	.	.	.															.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		I	K	Q	E	D	V	K	F	N	G	Y	A	I	E	C	R	I	N	A	E	D	P	K	K	N	F	A	P	S	T	R	V	I	E	R	Y	Y	V	P	G	G	F	G	I	R	V	E	H	A	A	A	R	G	F	E	V	T	P	Y	Y	D	S	M	I	A	K	L	I	T	W	A	P	T	W	D	E	A	V	E	R
Template Known Secondary structure				G	G	G					S									S			G	G	G	T	T					S	B			S						S	T	T									T	T		B			S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		381	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	H	A	A	G	Q	V	K	V	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	R	A	A	L	E	T	Y	E	I	T	G
Template Known Secondary structure								T					S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions