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Job DescriptionP33931
Confidence96.39%DateThu Jan 5 11:52:54 GMT 2012
Rank176Aligned Residues102
% Identity24%Templatec3zvmA_
PDB info PDB header:hydrolase/transferase/dnaChain: A: PDB Molecule:bifunctional polynucleotide phosphatase/kinase; PDBTitle: the structural basis for substrate recognition by mammalian2 polynucleotide kinase 3' phosphatase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  NAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDGDT
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Template Sequence  PNPEVVVAVGFPGAGKSTFIQEHLVSA. . . . GYVHVNRDTLGSW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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TTSSTGGG....T

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   362.......370.........380........ .390.........400.
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  AQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGIVILTTH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . QRCVSSCQAALRQGKRVVIDNT. . NPDVPSRARYIQCAKDAGVPCRCFNFCAT
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   402.......410.........420... ......430.........440.........450..
 
   187..190.......
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Query Sequence  QPLNVAESKIR
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Template Sequence  IEQARHNNRFR
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   453......460...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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