Return to main results Retrieve Phyre Job Id

Job DescriptionP33931
Confidence96.74%DateThu Jan 5 11:52:54 GMT 2012
Rank149Aligned Residues105
% Identity14%Templatec3p1jC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of human gtpase imap family member 2 in the2 nucleotide-free state
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  WVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDGDTAQCL
Query Conservation     
 
 








  
 
      
 
   
                           

 
 
             
Alig confidence 




























............................






















Template Conservation 

 
 
    




 
 
 
        ............................     






           
Template Sequence  RIILVGKTGTGKSAAGNSILRTCSKSQGS. . . . . . . . . . . . . . . . . . . . . . . . . . . . WREIVIIDTPDMFSWKDHCEALY
Template Known Secondary structure 

TTS



............................



GGGGSS


Template Predicted Secondary structure 









............................












Template SS confidence 















































































   24.....30.........40.........50.. .......60.........70.....
 
   111........120.........130.........140.........150.........160.........170....... ..180......
Predicted Secondary structure 






















..


Query SS confidence 


































































. .








Query Sequence  EALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQ. . GGIVILTTH
Query Conservation    
    
          

 
   

 

 

   
 






  


      
   
      ..  



 

Alig confidence 




.......................






































..








Template Conservation    
  .......................          


 
      
         
            


 

Template Sequence  KEVQR. . . . . . . . . . . . . . . . . . . . . . . CYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGHTIVLFTH
Template Known Secondary structure  .......................TT

STTB


GGGGGG
Template Predicted Secondary structure  .......................













Template SS confidence 













































































   93.... ..100.........110.........120.........130.........140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions