Job Description P33931 Confidence 94.90% Date Thu Jan 5 11:52:54 GMT 2012 Rank 339 Aligned Residues 159 % Identity 15% Template c3kx2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp Resolution 2.20 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		L	N	A	G	E	W	V	Q	I	T	G	S	N	G	A	G	K	T	T	L	L	R	L	L	T	.	.	.	G	L	S	R	P	D	A	G	E	V	L	W	Q	G	Q	P	L	H	Q	V	R	D	S	Y	H	Q	N	L	L	W	I	G	H	Q	P	G	I	K	T	R	L	T	A	L	E	N	L	H	F	Y	H	R
Query Conservation																											.	.	.
Alig confidence																											.	.	.														.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		Y	Q	N	N	Q	I	M	V	F	V	G	E	T	G	S	G	K	T	T	Q	I	P	Q	F	V	L	F	D	E	M	P	H	L	E	N	T	Q	V	A	C	T	.	.	.	.	Q	P	R	R	V	A	A	M	S	V	A	Q	R	V	A	E	E	M	D	V	K	L	G	E	E	V	G	Y	S	I	R	F	E	N	K
Template Known Secondary structure						S								T	T	S	S															G	G	G	G	T							.	.	.	.		S																T	T			B	T	T	T						T	T
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		D	G	D	T	A	Q	C	L	E	A	L	A	Q	A	G	L	A	G	F	E	D	I	P	V	N	Q	L	S	A	G	Q	Q	R	R	V	A	L	A	R	L	W	L	T	R	A	T	L	W	I	L	D	E	P	.	F	T	A	I	D	V	N	G	V	D	R	L	T	Q	R	M	A	Q	H	T	E	Q	G	G	I	V
Query Conservation																																																							.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	L	K	Y	M	T	D	G	M	L	L	R	E	A	M	E	D	H	D	L	S	R	Y	S	C	I	I	L	D	E	A	H	E	R	T	L	A	T	D	I	L	M	G	L	L	K	Q	V	V	K	R	R	P	D	L	K	I	I
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T		T	T									G	G	G																				T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.																		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		182	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.
Predicted Secondary structure							.																	.
Query SS confidence							.																	.
Query Sequence		I	L	T	T	H	.	Q	P	L	N	V	A	E	S	K	I	R	R	I	S	L	T	.	Q	T	R
Query Conservation							.																	.
Alig confidence							.																	.
Template Conservation
Template Sequence		I	M	S	A	T	L	D	A	E	K	F	Q	R	Y	F	N	D	A	P	L	L	A	V	P	G	R
Template Known Secondary structure					S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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