Job Description P33931 Confidence 96.85% Date Thu Jan 5 11:52:54 GMT 2012 Rank 138 Aligned Residues 110 % Identity 18% Template c3ec2A_ PDB info PDB header:replication Chain: A: PDB Molecule:dna replication protein dnac; PDBTitle: crystal structure of the dnac helicase loader Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	T	L	N	A	G	E	W	V	Q	I	T	G	S	N	G	A	G	K	T	T	L	L	R	L	L	T	G	L	S	R	P	D	A	G	E	V	L	W	Q	G	Q	P	L	H	Q	V	R	D	S	Y	H	Q	N	L	L	W	I	G	H	Q	P	G	I	K	T	R	L	T	A	L	E	N	L	H	F	Y	H	R
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	N	P	E	E	G	K	G	L	T	F	V	G	S	P	G	V	G	K	T	H	L	A	V	A	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	I	Y	E	K	K	G	I	R	G	Y	F	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S			G	G	G									S	S	S	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		D	G	D	T	A	Q	C	L	E	A	L	A	Q	A	G	L	A	G	F	E	D	I	P	V	N	Q	L	S	A	G	Q	Q	R	R	V	A	L	A	R	L	W	L	T	R	A	T	L	W	I	L	D	E	P	F	.	T	A	I	D	V	N	G	V	D	R	L	T	Q	R	M	A	Q	H	T	E	Q	G	G	I	V
Query Conservation																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	D	L	I	F	R	L	K	H	L	X	D	E	G	K	D	T	K	F	.	.	.	L	K	T	V	L	N	S	P	V	L	V	L	D	D	L	G	S	E	R	L	S	D	W	Q	R	E	L	I	S	Y	I	I	T	Y	R	Y	N	N	L	K	S	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T			S			.	.	.						T		S						T		S	S	S																				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
																	116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		182	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	T	T	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	T	N	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions