Job Description P33931 Confidence 96.65% Date Thu Jan 5 11:52:54 GMT 2012 Rank 156 Aligned Residues 155 % Identity 9% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	G	E	W	V	Q	I	T	G	S	N	G	A	G	K	T	T	L	L	R	L	L	T	G	L	S	R	P	D	A	G	E	V	L	W	Q	G	Q	P	L	H	Q	V	R	D	S	Y	H	Q	N	L	L	W	I	G	H	Q	P	G	I	K	T	R	L	T	A	L	E	N	L	H	F	Y	H	R	D	G	D
Query Conservation
Alig confidence																																																									.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	A	.	.	.	.	.	.	G	S	I	N	A	Q	K	I	K	A	A	R	R	D	F	A	S	E	D
Template Known Secondary structure		B		S	S									S	S	S	S															T	T								S	S	S														.	.	.	.	.	.	S									T	T	G	G	G	T			S
Template Predicted Secondary structure																																																									.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.							.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																											.	.									.	.	.	.	.	.	.
Query SS confidence																																											.	.									.	.	.	.	.	.	.
Query Sequence		T	A	Q	C	L	E	A	L	A	Q	A	G	L	A	G	F	E	D	I	P	V	N	Q	L	S	A	G	Q	Q	R	R	V	A	L	A	R	L	W	L	T	R	.	.	A	T	L	W	I	L	D	E	.	.	.	.	.	.	.	P	F	T	A	I	D	V	N	G	V	D	R	L	T	Q	R	M	A	Q	H	T	E
Query Conservation																																											.	.									.	.	.	.	.	.	.
Alig confidence																																											.	.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S	R	D	L	K	K	M	A	R
Template Known Secondary structure														T	S								S	S		B															S		S	S									S	S	S	S	B		S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		177		.	.	180	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		Q	.	G	G	I	V	I	L	T	T	H
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		E	L	D	V	V	V	I	A	L	S	Q
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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