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Job DescriptionP33931
Confidence100.00%DateThu Jan 5 11:52:54 GMT 2012
Rank13Aligned Residues203
% Identity26%Templatec2pcjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.... ...
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Query Sequence  MLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQGQPLHQVRDSY. . . . . HQN
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Template Sequence  ILRAENIKKVIRGYEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRK
Template Known Secondary structure  TTTT


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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   78.80.........90......... 100.........110.........120.........130.........140.........150.
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Query Sequence  LLWIGHQPGIKTRLTALENLHF. . . . . . YHRDGDTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWI
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Template Sequence  LGFVFQFHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDKLSRKPYELSGGEQQRVAIARALANEPILLF
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   152.......160.........170.........180.........190.........200......
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Query Sequence  LDEPFTAIDVNGVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRA
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Template Sequence  ADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHER. ELAELTHRTLEMKDGKV
Template Known Secondary structure  STTTTS
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   164.....170.........180.........190.........200 .........210.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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