Job Description P33931 Confidence 100.00% Date Thu Jan 5 11:52:54 GMT 2012 Rank 40 Aligned Residues 205 % Identity 20% Template c2ihyB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:abc transporter, atp-binding protein; PDBTitle: structure of the staphylococcus aureus putative atpase subunit of an2 atp-binding cassette (abc) transporter Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		G	M	L	E	A	R	E	L	L	C	E	R	D	E	R	T	L	F	S	G	L	S	F	T	L	N	A	G	E	W	V	Q	I	T	G	S	N	G	A	G	K	T	T	L	L	R	L	L	T	G	L	S	R	P	D	A	G	E	V	L	W	Q	G	Q	P	L	H	Q	V	R	D	S	.	.	.	Y	H	Q	N	L
Query Conservation																																																																										.	.	.
Alig confidence																																																																										.	.	.
Template Conservation
Template Sequence		X	L	I	Q	L	D	Q	I	G	R	X	K	Q	G	K	T	I	L	K	K	I	S	W	Q	I	A	K	G	D	K	W	I	L	Y	G	L	N	G	A	G	K	T	T	L	L	N	I	L	N	A	Y	E	P	A	T	S	G	T	V	N	L	F	G	K	X	P	G	K	V	G	Y	S	A	E	T	V	R	Q	H	I
Template Known Secondary structure														T	T													T	T									T	T	S	S									T	T	S	S			S							T	T	B		T	T	S	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.											.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure								.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		L	W	I	G	H	Q	.	.	P	G	I	K	T	R	L	T	A	L	E	N	L	H	F	Y	H	.	.	.	.	.	.	.	.	.	.	R	D	G	D	T	A	Q	C	L	E	A	L	A	Q	A	G	L	A	G	F	E	D	I	P	V	N	Q	L	S	A	G	Q	Q	R	R	V	A	L	A	R	L	W	L	T	R
Query Conservation								.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	V	S	H	S	L	L	E	K	F	Q	E	G	E	R	V	I	D	V	V	I	S	G	A	F	K	S	I	G	V	Y	Q	D	I	D	D	E	I	R	N	E	A	H	Q	L	L	K	L	V	G	X	S	A	K	A	Q	Q	Y	I	G	Y	L	S	T	G	E	K	Q	R	V	X	I	A	R	A	L	X	G	Q
Template Known Secondary structure										T	T	S		T	T	S	B							T	T	T						S	S	S																	T	T		G	G	G	T	T	S	B	G	G	G	S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		A	T	L	W	I	L	D	E	P	F	T	A	I	D	V	N	G	V	D	R	L	T	Q	R	M	A	Q	H	T	E	.	.	Q	G	G	I	V	I	L	T	T	H	Q	P	L	N	V	A	E	S	K	I	R	R	I	S	L	T	Q	T	R	A
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		P	Q	V	L	I	L	D	E	P	A	A	G	L	D	F	I	A	R	E	S	L	L	S	I	L	D	S	L	S	D	S	Y	P	T	L	A	X	I	Y	V	T	H	F	I	E	E	I	T	A	N	F	S	K	I	L	L	L	K	D	G	Q	S
Template Known Secondary structure			S						S	T	T	T	T																					T	T								S		G	G	G			T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions